Pairwise Alignments

Query, 649 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score = 72.0 bits (175), Expect = 6e-17
 Identities = 96/443 (21%), Positives = 169/443 (38%), Gaps = 80/443 (18%)

Query: 102 LVRWNMDFTEVLPNLAEKWEVSPDASEFTFHLIEGAK------WSDGHPFTADDVVFAIE 155
           LV +    T V P LA  WEVS +   +TFHL EG +      +S    F ADDV+F   
Sbjct: 59  LVEFERGGTAVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNADDVLFTFN 118

Query: 156 DCI-KNKELYSATPAQLS-VAGKAVD-----VSKVDDFTVKFKFAAPNALYLENLATPLG 208
             + K      A P +     G  +D     V K D  TV F     +A +++NLA    
Sbjct: 119 RMLDKGHRFRQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAMSFA 178

Query: 209 QHPTLFPKHYCSKFLPKYNAALDAEVKAAGVSSWTELFRAKCGDIEIPSRWSNVDKPTLD 268
              ++    Y  + L    +   +++    + +   +F+    D +I        K   D
Sbjct: 179 ---SILSAEYAEQLLA---SGRPSDINQQPIGTGPFVFQRYQKDSQIRY------KGNKD 226

Query: 269 PWVVKEPYSGGATRVVMTRNPYFWQVDTDGNQLPYINEINFGISQDVESLMLNVISGKID 328
            W   E         V   N  F               IN   S  ++ L  N     + 
Sbjct: 227 YWAANE---------VKIDNLVF--------------SINTDPSVRIQKLRRNECQVTLH 263

Query: 329 IQERHISVLANKPTLSQNMEKGNYRLMTLVPSAAQQCQIYLNITHKDPAMRKMFADKSFR 388
            +   +  L    TL Q +++  + L             Y+    + P   ++      R
Sbjct: 264 PRPADLPALKADSTL-QVLQQPGFNLG------------YIAYNTQHPPFDRL----EVR 306

Query: 389 QALSLGLNRQEIIEIVYFGQSEAYQTGPRPTHPWYHEKLARQSTEFDADKANELLDKAGY 448
           QA+ + +N++ I++ VY    +       PT   Y + +  +   +  +KA +L+ +AG 
Sbjct: 307 QAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSI--KDAPYAPEKARQLIQQAG- 363

Query: 449 DKKNGNGIRLRPDGQPIFFSIDVIPTLYPDLVDTLELVKAQWAQIGVDIKVNTIERALYY 508
                    ++P  +   +++ V     P+     E+++A W+++G  +++ + E   Y 
Sbjct: 364 ---------VKPGTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYL 414

Query: 509 TRGDDNAHDAAV--WPGPGGLDP 529
            R  +  HD A+  W G  G DP
Sbjct: 415 KRMKNGEHDIALIGWTGDNG-DP 436