Pairwise Alignments

Query, 874 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 878 a.a., Protein ClpV1 from Pseudomonas putida KT2440

 Score =  544 bits (1402), Expect = e-159
 Identities = 342/858 (39%), Positives = 489/858 (56%), Gaps = 54/858 (6%)

Query: 5   KYSERVRGFLQSAQTFALAENHQQFSPEHVLKVLLDDEQGMAASLIERAGGDAKEARLAN 64
           K +E  R   +SA    L+E+H +   EH+L  LLD+     A ++      A+  +   
Sbjct: 22  KLNETSRTATESAAALCLSEHHYEVEVEHLLLQLLDNNDSDLAPILRHYQVVAERLQAQL 81

Query: 65  DAALAKLPKVSGGNGGLSLTAPLAKVFSTAEDLAK-KAGDSFVTVERLLQALAIESSA-- 121
             AL    K  G     +L+  + ++   A  LA  + G   V    LLQAL  ++    
Sbjct: 82  VTALGTFKK--GNTRTPALSPHITRMIEQAWLLASIEYGVGQVRSAHLLQALLDDAELRR 139

Query: 122 ---STSASLKKAGATAQALN--QVINDIRKGRTAD-----------SANAEQGFDALKKY 165
              +++  L+K  A    LN   ++    + R A            S+ A     AL +Y
Sbjct: 140 VVIASAPELEKINADDLRLNLAALVEGSAESRQASPLASPAAPVSTSSKASGKTPALDQY 199

Query: 166 ARDLTEEAREGRLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIV 225
             +LT+ AREGR+DPV+GR+ E+R+ + +L+RR +NNP+L GE GVGKTA+ EGLALRI 
Sbjct: 200 TVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEGLALRIA 259

Query: 226 NGDVPESLKDKKLMALDMGALIAGAKYRGEFEERLKAVLNEVQAENGGIILFIDEMHTLV 285
            GDVP  LKD  L  LD+G L AGA  +GEFE RLKAV+ EV+     IILFIDE HTL+
Sbjct: 260 QGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFIDEAHTLI 319

Query: 286 GAGKADGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVLVDEPNVE 345
           G+G   G  DA+NLLKPALARGEL  + ATT  EY+K+ EKD ALARRFQ V V+EP+ +
Sbjct: 320 GSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKVEEPDED 379

Query: 346 DTISILRGLKEKYEQHHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQ 405
             I +LRGL  K  +HHKV + D ALV A  LSNRYIT R LPDKA+ ++D A +R+ + 
Sbjct: 380 KAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTACARIALA 439

Query: 406 VDSKPEELDELDRRIIQLKIEREALKQETDQ--SSVDRLRKLEDELADTEEKADALTARW 463
             S P  L++  R+I  L+ E + L  E  +      RL  L+  L   +++   L A+W
Sbjct: 440 QSSLPGALEDCRRQIDNLQAEIDVLGHEAGKGHDHARRLESLQAALQAEQQQEQQLNAQW 499

Query: 464 QAEKQKLGHAADLKKRLDEARNELAIAQRNGQFQRAGELTYGIIPGLEKELAAAEARDSS 523
           Q E +      +  K LD A +  A AQ+              +  L  ELA  +     
Sbjct: 500 QQELE----LVEQLKALDAAND--ADAQQ--------------LNTLRAELARVQ----- 534

Query: 524 GAGSMVQEVVTPDNIAHVVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQAVS 583
           G   +V  +V    IA V+S WTGIP+ KML  + + + R+   L + V+GQ  A+  + 
Sbjct: 535 GDQPLVHALVDSGAIAQVISGWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHALHEIG 594

Query: 584 KAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYMEKH 643
           K ++ SRA ++DPN+PIG F+ LGP+GVGKTE   +LA  L+  E  ++ ++MSEY E H
Sbjct: 595 KRIKISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAH 654

Query: 644 SVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTD 703
           +V+ L G+PPGYVGY EGG LTEAVRR+PY VVL DE+EKAHPDV  +  QV D G L D
Sbjct: 655 TVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDD 714

Query: 704 GQGRTVDFKNTIIIMTSNLGSEFMTQMGDNDDVDSVRELVMERVRSH----FRPEFLNRI 759
           G+GR ++F+NT+II+TSN G+E + Q   N       E ++E +R      F+P FL R+
Sbjct: 715 GEGREINFRNTVIILTSNTGTERIMQTCLNATELPTPEAIVEDLRDQLNHVFKPAFLGRL 774

Query: 760 DDIILFHRLRRDEMGAIVEIQLKRLVSLLA-DRKITLELDEDARSWLANKGYDPAYGARP 818
             I+ F+ ++   +  IV ++L+R+    A + +  L  D+     +A +  +   GAR 
Sbjct: 775 -SIVPFYPVQDQILERIVALKLERIAKRFARNHQAELSYDQALVKAIAARCTEVDSGARN 833

Query: 819 LKRVIQKSVQDRLAEMIL 836
           +  ++ +++   LA+ +L
Sbjct: 834 IDNILSQTLMPELAQRVL 851