Pairwise Alignments

Query, 874 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 854 a.a., Chaperone protein ClpB from Pseudomonas putida KT2440

 Score =  961 bits (2483), Expect = 0.0
 Identities = 491/857 (57%), Positives = 641/857 (74%), Gaps = 4/857 (0%)

Query: 1   MNIDKYSERVRGFLQSAQTFALAENHQQFSPEHVLKVLLDDEQGMAASLIERAGGDAKEA 60
           M ID+ + +++  +  AQ+ A+  +H    P H+L+ LL+ + G    L+ + G D    
Sbjct: 1   MRIDRLTSKLQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFDINGL 60

Query: 61  RLANDAALAKLPKVSGGNGGLSLTAPLAKVFSTAEDLAKKAGDSFVTVERLLQALAIESS 120
           R      L +LPK+    G ++++  LA++ + A+ LA++ GD F++ E +L A A++ +
Sbjct: 61  RQGLVKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLA-AMDEN 119

Query: 121 ASTSASLKKAGATAQALNQVINDIRKGRTADSANAEQGFDALKKYARDLTEEAREGRLDP 180
           +     L   G + +AL   IN++R G   + ANAE+   AL KY  DLT+ A EG+LDP
Sbjct: 120 SKLGKLLLSQGVSKKALENAINNLRGGAAVNDANAEESRQALDKYTVDLTKRAEEGKLDP 179

Query: 181 VIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKKLMA 240
           VIGRDDEIRRT+QVL RRTKNNPVLIGEPGVGKTAIAEGLA RI+NG+VP+ LK K+L+A
Sbjct: 180 VIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLA 239

Query: 241 LDMGALIAGAKYRGEFEERLKAVLNEVQAENGGIILFIDEMHTLVGAGKADGAMDASNLL 300
           LDMGALIAGAKYRGEFEERLK++LNE+  + G IILFIDE+HT+VGAGK +GAMDA N+L
Sbjct: 240 LDMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNML 299

Query: 301 KPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVLVDEPNVEDTISILRGLKEKYEQ 360
           KPALARGELHCVGATTL+EYR+ +EKD AL RRFQ VLV+EP+ EDTI+ILRGLKE+YE 
Sbjct: 300 KPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEV 359

Query: 361 HHKVRISDSALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRI 420
           HHKV I+D A++AAA LS+RYITDR LPDKAIDL+DEAASR+RM++DSKPE LD LDRR+
Sbjct: 360 HHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRL 419

Query: 421 IQLKIEREALKQETDQSSVDRLRKLEDELADTEEKADALTARWQAEKQKLGHAADLKKRL 480
           IQLK+E +ALK+E D+++  RL KL +E+   E +   L   W +EK ++  +A +++++
Sbjct: 420 IQLKVESQALKKEEDEAAKKRLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKI 479

Query: 481 DEARNELAIAQRNGQFQRAGELTYGIIPGLEKELAAAEARDSSGAGSMVQEVVTPDNIAH 540
           +++R EL  A+R G   R  EL YG+IP LE+ L   +    +    +++  VT + IA 
Sbjct: 480 EQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQMVDQHGKTD-NQLLRNKVTEEEIAE 538

Query: 541 VVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPI 600
           VVS+WTGIPV KMLEG+REKLL+ME+ L + V+GQ EAV AV+ AVRRSRAGL DPNRP 
Sbjct: 539 VVSKWTGIPVAKMLEGEREKLLKMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPS 598

Query: 601 GSFIFLGPTGVGKTELTKSLARFLFDDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEE 660
           GSF+FLGPTGVGKTEL K+LA FLFD E AMVR+DMSE+MEKHSVARLIGAPPGYVGYEE
Sbjct: 599 GSFLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEE 658

Query: 661 GGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTS 720
           GG LTEAVRR+PY VVL DE+EKAHPDVFNVLLQVL+DGRLTD  GRTVDF+NT+I+MTS
Sbjct: 659 GGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTS 718

Query: 721 NLGSEFMTQMGDNDDVDSVRELVMERVRSHFRPEFLNRIDDIILFHRLRRDEMGAIVEIQ 780
           NLGS  + ++    D ++ R  VM+ V +HFRPEF+NRID++++F  L R+++  I EIQ
Sbjct: 719 NLGSAQIQEL--VGDREAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQ 776

Query: 781 LKRLVSLLADRKITLELDEDARSWLANKGYDPAYGARPLKRVIQKSVQDRLAEMILGGEI 840
           L RL S L +R+++L L  +A   L   GYDP YGARPLKR IQ+ +++ LA++IL G+ 
Sbjct: 777 LGRLRSRLLERELSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILAGKF 836

Query: 841 PDGSRVKVTSGTDRLLF 857
             G+ +      D ++F
Sbjct: 837 LPGTAITAKVEGDEIVF 853