Pairwise Alignments

Query, 188 a.a., RNA polymerase sigma factor from Agrobacterium fabrum C58

Subject, 169 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 92.4 bits (228), Expect = 4e-24
 Identities = 51/155 (32%), Positives = 87/155 (56%), Gaps = 7/155 (4%)

Query: 22  NLRAFAISLIRSRDRADDLVQDTIMKAWAKQDSFQPGTNMRAWLVTILRNEFYSQIRKSG 81
           +L+ FA+ L +  D A+DL+Q+T++KA+  +D F  GTN+RAWL TI++N F+++ ++  
Sbjct: 16  SLKPFALRLTKDVDDANDLLQETMLKAYTNRDKFSDGTNLRAWLYTIMKNTFFTRYQRMV 75

Query: 82  RE---VQDTDGVY---TSRLSVPPEQHGSVDLQDFRTALAKLPDDQREAILLIGASGFAY 135
           R    V  TD ++   +  +S+    H    + D    +  L  D R   ++    GF Y
Sbjct: 76  RRATFVDSTDNLHYINSGDVSIENRAHSKFAMDDINYCINHLNADYRTPFMMY-FKGFKY 134

Query: 136 EEAAEICGCPVGTIKSRVSRARLRLQELLGIENEN 170
           +E A+    P+GT+K+R+  AR  L++ L I   N
Sbjct: 135 QEIADDLNLPIGTVKNRIHLARKILKDNLKIYKTN 169