Pairwise Alignments

Query, 317 a.a., aliphatic sulfonate ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 321 a.a., ABC transporter, substrate binding protein (aliphatic sulfonate) from Agrobacterium fabrum C58

 Score =  245 bits (626), Expect = 9e-70
 Identities = 130/315 (41%), Positives = 193/315 (61%), Gaps = 6/315 (1%)

Query: 4   ITRRA---LSAGLIAAVALSVLPFAAQAAEELKIGYQKTGLPVIARQQGVIEKALEAKGV 60
           ITRR    L AG   AV L  +  A  A   L+IG+QK G+  +A+ QG +E  L+ +G+
Sbjct: 2   ITRRGTLGLLAGSTGAVFLPHIRRAGAATTTLRIGWQKNGVIALAKSQGALEALLKDRGI 61

Query: 61  KVSWVEFTAGPPLVEALNVGSINVGWTGDAPPIFGQAAGSAIVYVAALPSNGKGEAIFTK 120
           +V W EF++GPPL+EAL  G++++G TGD PP+F QAAG  + YV    +   G AI  +
Sbjct: 62  EVKWSEFSSGPPLLEALGAGALDIGPTGDVPPLFAQAAGGNLRYVGTYKAAAGGSAILVQ 121

Query: 121 PESGIKSVADLKGKKVGVGKGTSAHNLLVAALEKNGLKLSDIDVTYLSPADAAAAFASDK 180
            +S +K++ DLKGKKV   +G+SAHN+ V AL K GL LSDI    L+P DAAAAF S  
Sbjct: 122 KDSPLKTLEDLKGKKVAFKRGSSAHNVTVKALRKAGLTLSDITPVDLAPPDAAAAFRSGS 181

Query: 181 IDAWAVWDPFYAIAETRYKPVTLARTSDVLDVKTYFLANRDYAKSHADTINTNVGALGEA 240
           IDAW++WDP++A+AE       L+    ++D  +YFLAN D+ +++ D +   +  L   
Sbjct: 182 IDAWSIWDPYFAVAEKEPTTRVLSTAEGIVDPWSYFLANGDFVEANPDLVPLILKELANV 241

Query: 241 AKWSAANRDKVAAALHEVTGVPLEAQTLAANR--SEFG-ITRIDDKIVASQQETADRFYR 297
              + AN D  A +L  +TGVP +   ++  R  ++ G ++ + D+ +A QQ  AD FY 
Sbjct: 242 GAKAQANIDATAKSLAAITGVPEDVTKVSLTRPGADLGRVSLVPDEAIAYQQALADEFYD 301

Query: 298 LGLIPKQISIKDAVW 312
           L ++PK++ + D VW
Sbjct: 302 LKIVPKKLKVTDIVW 316