Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 297 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  199 bits (506), Expect = 6e-56
 Identities = 113/295 (38%), Positives = 168/295 (56%), Gaps = 10/295 (3%)

Query: 5   RRLVPDIITLQAFECAARHGNFTRAAEELNLTQSAVSRQIGELEAQTGMQLFERIRRRVV 64
           R+ +P++  LQAFE +AR G+FTRAA EL LTQSAV RQ+  LE + G+ LF R+RRR+ 
Sbjct: 2   RKDIPNLGALQAFEASARLGSFTRAAAELALTQSAVGRQVAMLEQRLGVPLFSRVRRRLT 61

Query: 65  LSEAGRKFLPDVRRLLQQSEQLMVRAVSAGTSHASLSVATLPTFGSRWLMPRLSRFIDAN 124
           L++ GR++   +RR L Q  +  +   +       L +A +PTF ++WL+PRL  F + +
Sbjct: 62  LTDVGREYAARIRRHLDQIRRDTLEISAGHEMGFVLELAVVPTFATQWLIPRLPEFSELH 121

Query: 125 PDMTITIGSRSHPFDFDEEGFDLAIHYGQPIW--AHGTCTFLCNEVIVPVASPALLRRAG 182
           P++T+ + +RS PF F E  +D AI++G   W    G   F   E +VP+ SPA      
Sbjct: 122 PNITVNLSARSQPFSFQENAYDAAIYFGDQFWPNTRGGLIFAEGE-MVPICSPAF---RD 177

Query: 183 VNRAQDLAGQPL---LHVTTRPKLWTEWLEMNG-VTADNAYQGSRFDQFSMIIEAAASGI 238
            N   D AG      +H++TR   W +W    G     +A +G R++ F+M++ A A+G+
Sbjct: 178 ANGPWDEAGFERCRHVHLSTRAHAWRDWYAQQGWEYTVHASRGPRYELFTMVVAATAAGM 237

Query: 239 GFALLPRYLIEAELASSRLEIVFDIPLQTDKSYYVALPEGRQDNVLARAFQAWLL 293
           G  L PR L+E EL +  L I  D  L   + YY A PEGR  +     F+ W+L
Sbjct: 238 GVGLAPRILVEHELKTGELVIPVDRHLDVRQGYYFAYPEGRPASGALEHFKRWVL 292