Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 294 a.a., putative LysR-type transcriptional activator protein from Pseudomonas putida KT2440

 Score =  177 bits (450), Expect = 2e-49
 Identities = 110/293 (37%), Positives = 160/293 (54%), Gaps = 3/293 (1%)

Query: 5   RRLVPDIITLQAFECAARHGNFTRAAEELNLTQSAVSRQIGELEAQTGMQLFERIRRRVV 64
           R L P +  L AFE AARH ++TRAA EL+LTQSAVSRQ+  LE Q G+ LF R  R+V 
Sbjct: 4   RHLTPSMSLLLAFEAAARHESYTRAAAELSLTQSAVSRQVQALEQQLGLTLFRREGRQVQ 63

Query: 65  LSEAGRKFLPDVRRLLQQSEQLMVRAVSAGTSHASLSVATLPTFGSRWLMPRLSRFIDAN 124
           L++ GR +  ++   L +     ++A++  +   +L +ATLPTFGS+WL+PRL  F  A+
Sbjct: 64  LTDVGRLYQRELSEALGRIRSATLQALAYQSGVGTLRLATLPTFGSKWLLPRLHAFYSAH 123

Query: 125 PDMTITIGSRSHPFDFDEEGFDLAIHYGQPIWAHGTCTFLCNEVIVPVASP-ALLRRAGV 183
           P M + I SR    +FD    D AI           C  L  E +V +  P A +   G 
Sbjct: 124 PGMLVHIHSRIETINFDTSEIDAAIGVASHDLPGLVCHRLHAEELVVILPPEAGVGSQGW 183

Query: 184 NRAQDLAGQPLLHVTTRPKLWTEWLEMNGVTADNAYQGSRFDQFSMIIEAAASGIGFALL 243
           + A+ ++ + LL+V   P  W EW   +G+       G  F+  S +I+A  +GIG  L+
Sbjct: 184 SPAR-ISEEVLLNVANNPHAWGEWFSHHGLPHRAMRLGPSFELTSHLIQAVRAGIGIGLV 242

Query: 244 PRYLIEAELASSRLEIVFDIPLQTDKSYYVALPEGRQDNVLARAFQAWLLDQV 296
           PR L+E ELA   L     +   + +SYY+  P   +     RAF+ WLL+Q+
Sbjct: 243 PRILVEEELAKGELYSP-GVAFASQRSYYLIYPPRNEALPSLRAFRGWLLEQI 294