Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  210 bits (534), Expect = 4e-59
 Identities = 115/291 (39%), Positives = 171/291 (58%), Gaps = 1/291 (0%)

Query: 5   RRLVPDIITLQAFECAARHGNFTRAAEELNLTQSAVSRQIGELEAQTGMQLFERIRRRVV 64
           RR +P    L  FE AAR+ +FT+AA+EL LTQ AV RQIG LEA   ++LF R RR V 
Sbjct: 2   RRKIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGVR 61

Query: 65  LSEAGRKFLPDVRRLLQQSEQLMVRAVSAGTSHASLSVATLPTFGSRWLMPRLSRFIDAN 124
           L+EAG  +   V   L   E+  +  +    ++  + +A +PTFG++WL+PRL  F   +
Sbjct: 62  LTEAGLSYSRQVAAQLDAVERDTLSVMRQQGANV-IELAVVPTFGTQWLLPRLKDFQQRH 120

Query: 125 PDMTITIGSRSHPFDFDEEGFDLAIHYGQPIWAHGTCTFLCNEVIVPVASPALLRRAGVN 184
           P++T+ + +R+ PF F +  FD AI++G   W+      L  E  VPV SPALL   G+ 
Sbjct: 121 PEVTVNLTNRTRPFLFADTTFDAAIYFGDADWSGTQSHQLMGENPVPVCSPALLNGQGML 180

Query: 185 RAQDLAGQPLLHVTTRPKLWTEWLEMNGVTADNAYQGSRFDQFSMIIEAAASGIGFALLP 244
            A+ +A  PLL  +TRP  W +W    G+  +    G R++ FSM+ +AA   +G AL+P
Sbjct: 181 EARHIAQLPLLQQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDMGIALIP 240

Query: 245 RYLIEAELASSRLEIVFDIPLQTDKSYYVALPEGRQDNVLARAFQAWLLDQ 295
            +LI+ EL   RL +     L +DK+YY+ +PE + ++   RAF+ WL+ Q
Sbjct: 241 PFLIQRELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWLVSQ 291