Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 308 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  215 bits (548), Expect = 9e-61
 Identities = 118/300 (39%), Positives = 178/300 (59%), Gaps = 4/300 (1%)

Query: 3   PRRRLVPDIITLQAFECAARHGNFTRAAEELNLTQSAVSRQIGELEAQTGMQLFERIRRR 62
           P RR +P +  L AFE A+R G+ T AA EL LTQ AVSRQI  LE Q G+ LF R R+ 
Sbjct: 4   PPRRFLPSLSLLAAFEAASRTGSVTAAARELGLTQGAVSRQILALEEQLGVALFLRERQT 63

Query: 63  VVLSEAGRKFLPDVRRLLQQSEQLMVRAVSAGTSHASLSVATLPTFGSRWLMPRLSRFID 122
           + L+ AG  +  ++R  L++     +  + A     +L++  LP+FG+RWL+PRL  FI 
Sbjct: 64  IRLTRAGEGYAREIREALRRISTASLN-LRANPDGGTLNLGVLPSFGTRWLVPRLPDFIA 122

Query: 123 ANPDMTITIGSRSHPFDFDEEGFDLAIHYGQPIWAHGTCTFLCNEVIVPVASPALLRRAG 182
            +P +++ + +RS  FDF  +  D AIH+G P W      FL +E ++PV SPA     G
Sbjct: 123 RHPGISVNLLTRSSLFDFRTDTVDAAIHFGLPHWPGTELAFLMHEKVIPVCSPAFKELYG 182

Query: 183 VNRAQDLAGQPLLHVTTRPKLWTEWLEMNGVTADNAYQGSRFDQFSMIIEAAASGIGFAL 242
           ++R  DL   PLLH+TTRP  W +W   + V  DN + G  FDQF+ I EA+++G+G +L
Sbjct: 183 LSRPDDLLHVPLLHMTTRPDAWEQWFRSHDVRFDNVH-GMLFDQFTTIAEASSAGVGASL 241

Query: 243 LPRYLIEAELASSRLEIVFDIPLQTDKSYYVALPEGRQDNVLARAFQAWLLDQ--VGKPV 300
           +P ++IE EL S RL       ++++++YY+A    R       +F+ W++ Q  +G+ V
Sbjct: 242 VPSFMIEEELRSGRLVSAVAGEVESEEAYYLACMPDRATYPPLESFRRWIVYQAAIGRDV 301