Pairwise Alignments

Query, 531 a.a., GMC type oxidoreductase from Agrobacterium fabrum C58

Subject, 565 a.a., choline dehydrogenase from Pseudomonas putida KT2440

 Score =  327 bits (838), Expect = 7e-94
 Identities = 204/532 (38%), Positives = 297/532 (55%), Gaps = 10/532 (1%)

Query: 3   EYDYIVIGAGSAGCVLANRLSKDPNNRVLLLEAGGNDNYHW---IHIPVGYLYCINNPRT 59
           E+DYI++GAGSAG  LA RL++D    VLLLEAGG D Y +     +P    + +   R 
Sbjct: 4   EFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPD-YRFDFRTQMPAALAFPLQGRRY 62

Query: 60  DWCFKTAEEPGLNGRALIYPRGKVLGGCSSINGMIYMRGQARDYDVWRQL-GCEGWGWSD 118
           +W ++T  EP ++GR +   RGK LGG S INGM Y+RG A D+D W +L G E W + D
Sbjct: 63  NWAYETDPEPYMDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWTYLD 122

Query: 119 ILPYFMKSEDFYRGKSDLHSAGGEWRVEKARVRWDVL-DAFQKAAGEAGIPATDDFNRGD 177
            LPYF K+E    G +D H   G   V   +   + L  A  +A  +AG P T+D N   
Sbjct: 123 CLPYFRKAETRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTEDLNGYQ 182

Query: 178 NEGAGYFDVN-QRSGWRWNTAKAFLKPALGRKNLTVLTKAHVKRLIIEECRVTAVEFHHD 236
            EG G  D    ++G R +TA+ +L  A  R NLT++T A   R++ +  R   V +   
Sbjct: 183 QEGFGPMDRTVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLFDGKRAIGVTYLVG 242

Query: 237 GVLKKM--RARRETVLSAGAIGSPHILELSGVGRGDVLQAAGIDTVAEVHGVGENLQDHL 294
              +++  RAR+E ++S+GAI SP +L+ SGVG   +L++  I  V ++ GVGENLQDHL
Sbjct: 243 DSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPGVGENLQDHL 302

Query: 295 QLRMVYKVSGVLTLNERASTLFGKARIGLEYALTRSGPMSMAPSQLGVFTRSSPEKETAD 354
           +L + Y  +  ++L   +   + +  IG E+    +G  +    + G F R+ PE +  +
Sbjct: 303 ELYLQYACTQPVSLYP-SLLWWNQPAIGAEWMFNGTGIGASNQFEAGGFIRTRPEFKWPN 361

Query: 355 LEYHVQPVSLDKFGDPVHTFPAITASVCNLRPESRGSVHVKGPDFAMQPEIRPNYLSTEG 414
           ++YH  PV+++  G          A + ++R  +RG + VK  D    P I  NY+STE 
Sbjct: 362 IQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPARGRIQVKSKDPRQHPSILFNYMSTEQ 421

Query: 415 DRQVAIDAMRLTRRIVAQPAFSRFNPQEYRPGPSFENDNDLAKAAGDIGTTIFHPVGTLR 474
           D Q   D +RLTR I+AQPA   +  +E  PG   + D  L K   +   T FHP  + +
Sbjct: 422 DWQEFRDGIRLTREIMAQPALDPYRGREISPGADVQTDEQLDKFIREHAETAFHPSCSCK 481

Query: 475 MGSDVESVVDNRLKFRRLAGLRVADASVMPRITSGNTNSPTIMIAEKAADMI 526
           MG+D  +VVD   +   + GLRV DAS+MP I +GN N+ TIMIAEK +D I
Sbjct: 482 MGTDDMAVVDGEGRVHGMKGLRVVDASIMPLIITGNLNATTIMIAEKISDKI 533