Pairwise Alignments

Query, 295 a.a., branched chain amino acid ABC transporter permease from Agrobacterium fabrum C58

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  242 bits (617), Expect = 8e-69
 Identities = 123/287 (42%), Positives = 178/287 (62%), Gaps = 1/287 (0%)

Query: 9   IQALLGQLLIGLINGSFYALLSLGLAVIFGLLRVINFAHGAQYMLGAFVAFLGLQYFGIN 68
           ++ +L QL  GL  G+   +++LGL ++FG+L ++NFAHGA +M+GA+         G +
Sbjct: 3   LELILMQLFSGLALGAILVMVALGLTIVFGMLGIVNFAHGALFMVGAYAGLWIAAQTG-S 61

Query: 69  FWMALIVTPLVVALFGAIVERFMLSRLYDLDPLYGLLFTFGLALVVEGTFRWLYGAAGQP 128
           FW ALIV P+ V + G  +ERF++  LY   P   LL TFGL  V+  T R  +G  G P
Sbjct: 62  FWWALIVAPIAVGVLGMAIERFLIRPLYGRTPDDPLLLTFGLGYVLVETVRITFGTDGIP 121

Query: 129 YSVPRELAGGTNLGFMFLPNYRAFVVVISLVACIATWALIEKTRLGSYLRAATENPTLVQ 188
           +S P  L G  +LG  + P YR FVV +  V  +  W  +EKTR G  +RA   +P +++
Sbjct: 122 FSAPDALQGVVDLGVGYFPIYRLFVVGVVAVILLLLWVALEKTRFGLIVRAGARDPLIMK 181

Query: 189 AFGINVPVLLTLTYALGAGLAGFTGVLAAPIYQVSPLMGTNLIIVVFAVVVVGGMGSIMG 248
             G++V  L  L + LG GL    GVLAAP+  VSP MGT ++   F V V+GGMGS++G
Sbjct: 182 VLGVDVSRLWLLVFGLGVGLTALGGVLAAPMRNVSPEMGTLVLAEAFVVTVIGGMGSLLG 241

Query: 249 AIVTGYMLGIAEGLTKVFYPEASNIVIFVIMAFVLLIRPAGLFGKDA 295
           A+V G ++G+A  +T +F PE + IV+F +MA +LL+RP GLFG+ A
Sbjct: 242 AVVAGLLVGVAVSMTALFAPEMATIVMFGLMALILLVRPQGLFGRPA 288