Pairwise Alignments

Query, 268 a.a., branched chain amino acid ABC transporter ATPase from Agrobacterium fabrum C58

Subject, 844 a.a., ABC transporter ATP-binding/permease protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  184 bits (467), Expect = 6e-51
 Identities = 94/243 (38%), Positives = 144/243 (59%)

Query: 23  VLSARGLTKTFGAFAAVKNVDLDVHHARVHALIGPNGAGKTTVFNLLTKFLQPTGGAITF 82
           VL A  +   FG   AV+  +L V   ++HALIGPNGAGKTT FNL++    P+ G +  
Sbjct: 349 VLEASEVGMRFGGIQAVRGANLRVEAGQIHALIGPNGAGKTTTFNLISGMFPPSTGTVRL 408

Query: 83  MGTDITKTPPDKVARLGLVRSFQISAVFPHLTVLENVRVALQRPNSLATQFWLPLSSLDR 142
            G  I +  PD++ + GL RSFQI+ +F  LT+ EN+R++LQ  ++    FW  + S   
Sbjct: 409 HGQPIHQLAPDRICQQGLARSFQITNLFKGLTIEENLRLSLQARHAARFNFWRDIDSYPE 468

Query: 143 LNARAEELISMVGLTREKNALAADLSYGRKRVLEIATTLALDPKVLLLDEPMAGMGGEDV 202
           ++A   EL+  +GL   +     DLSYG +R++++   L   P+VLL+DEP+AG+   + 
Sbjct: 469 IHAETAELMKFLGLQGMEAVGGGDLSYGGQRLVDLGIALGSKPQVLLMDEPLAGLAAAER 528

Query: 203 SHVAELIREVAKTRAVLMVEHNLKVVADICHHVTVLQRGEILAEGDYAAVSADPRVRTAY 262
             V+ L++ +A    VL+VEH++  V ++ H VTV+ +GE+L  G    V  D RV+  Y
Sbjct: 529 ERVSRLVKTIASNIPVLIVEHDIDRVLELSHRVTVMNQGEVLMSGTPDQVRDDQRVQEIY 588

Query: 263 MGT 265
            GT
Sbjct: 589 TGT 591



 Score = 92.0 bits (227), Expect = 4e-23
 Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 12/232 (5%)

Query: 18  AEPRVVLSARGLTKTFGAFAAVKNVDLDVHHARVHALIGPNGAGKTTVFNLLTKFLQPTG 77
           A+  VVL    +   +G    + +  L V    + AL+G NGAGK+T+   L   + P  
Sbjct: 605 ADRPVVLDFHKVNAFYGKSHILNDASLQVREGEIVALLGRNGAGKSTLLKSLMGLVPPAN 664

Query: 78  GAITFMGTDITKTPPDKVARLGLVRSFQISAVFPHLTVLENVRVA-LQRPNSLATQFWLP 136
           G + F G ++   P   +AR G+    Q   +F  +TV EN+ +  L RP   +T     
Sbjct: 665 GRVHFNGQELAGLPAPDIARRGVGYVPQGRGLFAGMTVAENLSLGRLARPTDGST----- 719

Query: 137 LSSLDRLNARAEELISMVGLTREKNALAAD-LSYGRKRVLEIATTLALDPKVLLLDEPMA 195
              +    AR  E    +   +E+  +AAD LS G ++++ +A  L+ + K+LLLDEP  
Sbjct: 720 --GVVWDEARIFEYFPRL---KERMHVAADYLSGGEQQMVAVARALSGNVKLLLLDEPFE 774

Query: 196 GMGGEDVSHVAELIREVAKTRAVLMVEHNLKVVADICHHVTVLQRGEILAEG 247
           G+    V  +  +  ++ +  ++++VEHNL +V  +   V  L+RG +  EG
Sbjct: 775 GLAPTVVQELFTVFDKLRQHISIVIVEHNLDLVLALADRVYALERGAVFHEG 826