Pairwise Alignments

Query, 304 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  238 bits (606), Expect = 2e-67
 Identities = 127/277 (45%), Positives = 179/277 (64%), Gaps = 6/277 (2%)

Query: 26  WFYFRQNRGAVIGLAVFILLVLIAVFAAVIAPHDPTQQYRDALLVPPVWQDGGRAAFLLG 85
           W    QNR + IG+ + +++VL+A+FA +IAP+DP QQ     L PP       A F LG
Sbjct: 16  WQALFQNRLSWIGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPP------SAEFWLG 69

Query: 86  TDAVGRDMLSRLIYGAQYSLFIGVVVVSIALVGGIVIGLVAGFFGGWVDTVIMRVMDVIL 145
           TD  GRD+LSRLIYG + SL +G V V IA+V G  +G++AG+ GG  D +I   +DV+L
Sbjct: 70  TDTYGRDVLSRLIYGTRVSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLL 129

Query: 146 AFPSLLLALVLVAILGPGLTNAMIAIAIVYQPHFARLTRAAVMSELRREYVTAARVAGAG 205
           +FP+LLL L++ A+LG  L N +IAIAI     F R+ RA  ++  +R++V A R  G G
Sbjct: 130 SFPTLLLGLMVAAMLGASLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYG 189

Query: 206 NLRLMFKTILPNCLAPLIVQATLSFSSAVLDAAALGFLGMGAQPPASEWGTMLAEAREFI 265
             RLM   ILPN ++ ++V   L  ++A+   A+L F+G+G  PPA  WG+M+ E  E I
Sbjct: 190 PGRLMTVHILPNMISEVLVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENI 249

Query: 266 LRAWWVVTLPGLTILISVLAINLMGDGLRDALDPKLK 302
           L AWW+   P L IL++VLA++L+GD LRDA DPK +
Sbjct: 250 LDAWWLTVFPSLAILLTVLALSLLGDALRDANDPKTR 286