Pairwise Alignments

Query, 304 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 296 a.a., ABC-type antimicrobial peptide transport system, permease component from Enterobacter asburiae PDN3

 Score =  218 bits (555), Expect = 1e-61
 Identities = 118/273 (43%), Positives = 167/273 (61%)

Query: 26  WFYFRQNRGAVIGLAVFILLVLIAVFAAVIAPHDPTQQYRDALLVPPVWQDGGRAAFLLG 85
           W  F  +  A+IGL     LVL+ VF +  AP+   QQ+    L+PP W   G  +F LG
Sbjct: 20  WRKFYGDTTAMIGLYGCAGLVLLCVFGSWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLG 79

Query: 86  TDAVGRDMLSRLIYGAQYSLFIGVVVVSIALVGGIVIGLVAGFFGGWVDTVIMRVMDVIL 145
           TD +GRD+LSRL+ GA  ++    VV   A + G+ +G+ AG   G    V+  ++D +L
Sbjct: 80  TDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLALGIFAGSTHGLRSAVLNHILDTLL 139

Query: 146 AFPSLLLALVLVAILGPGLTNAMIAIAIVYQPHFARLTRAAVMSELRREYVTAARVAGAG 205
           + PSLLLA+++VA  GP L++AM A+ +   P   R   + V  EL +EYV AAR+ GA 
Sbjct: 140 SIPSLLLAIIVVAFAGPHLSHAMFAVWLAILPRIVRSVYSMVHDELEKEYVVAARLDGAT 199

Query: 206 NLRLMFKTILPNCLAPLIVQATLSFSSAVLDAAALGFLGMGAQPPASEWGTMLAEAREFI 265
              +++  +LPN  A L+ + T + S A+LD AALGFL +GAQ P+ EWG ML +A E I
Sbjct: 200 TFNILWFAVLPNIAAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELI 259

Query: 266 LRAWWVVTLPGLTILISVLAINLMGDGLRDALD 298
             A W V LPG  I++SVL INL+GDG+R A++
Sbjct: 260 YVAPWTVMLPGAAIMVSVLLINLLGDGIRRAIN 292