Pairwise Alignments

Query, 304 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  236 bits (601), Expect = 6e-67
 Identities = 122/265 (46%), Positives = 169/265 (63%), Gaps = 6/265 (2%)

Query: 36  VIGLAVFILLVLIAVFAAVIAPHDPTQQYRDALLVPPVWQDGGRAAFLLGTDAVGRDMLS 95
           V G  + +L++L+ +F+  +A HDP      A L+PP       AA   GTD VGRD+ S
Sbjct: 34  VTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPP------SAAHWFGTDEVGRDLFS 87

Query: 96  RLIYGAQYSLFIGVVVVSIALVGGIVIGLVAGFFGGWVDTVIMRVMDVILAFPSLLLALV 155
           R++ G+Q S+  G+VVV+IA + G ++G ++G  GG  D +IMR+MD++L+ PSL+L + 
Sbjct: 88  RVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMA 147

Query: 156 LVAILGPGLTNAMIAIAIVYQPHFARLTRAAVMSELRREYVTAARVAGAGNLRLMFKTIL 215
           L A LGP L NAM+AIAIV  P + RL R   +   +  YV AA+  GA    L+   IL
Sbjct: 148 LAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHIL 207

Query: 216 PNCLAPLIVQATLSFSSAVLDAAALGFLGMGAQPPASEWGTMLAEAREFILRAWWVVTLP 275
            N L PLIVQA+L   SA+L AA LGF+G+GAQ P++EWG M+A  R ++L  WW    P
Sbjct: 208 RNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFP 267

Query: 276 GLTILISVLAINLMGDGLRDALDPK 300
           G  IL++ +  NL GDG+RD LDPK
Sbjct: 268 GAAILLTAVGFNLFGDGIRDLLDPK 292