Pairwise Alignments

Query, 534 a.a., dipeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  548 bits (1412), Expect = e-160
 Identities = 277/529 (52%), Positives = 364/529 (68%), Gaps = 6/529 (1%)

Query: 6   RSLLIASALAMASAMPAMAKTFVYCSEASPEGFDPSPYTAGGTFDASAHPVYNRLTEFKK 65
           + LL+A+ L     +   A T VYCSEASP GFDPS YT+G  FDASA  V+NRLT+FK+
Sbjct: 7   KPLLLAAGLLACMPLAQAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLTQFKR 66

Query: 66  GTTEVEPGLAEKWDVSSDGLEYTFHLRKGVKFHSNDKFTPSRDFNADDVIFSYNRQGDTK 125
           G TEVEPGLA  WD+S DGL YTFHLR GVKFH+ D F+P+RDFNADDV+F++NR  D +
Sbjct: 67  GGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDAQ 126

Query: 126 NPWNQYIAGITYEYYNSMEMPSLIKEIVKVDDYTVKFVLTRPEAPFLANIAMPFASIVSK 185
           +P+ Q     +  Y+  M + + IK + K+DD+TV+F L   +A F+ N+AM FAS+ S 
Sbjct: 127 SPFRQAYPSES-PYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASVQSA 185

Query: 186 EYADTLEKAGTKEDFNNLPIGTGPFKFVAYQKDAVIRYQKNADYW-GDAPKIDDLIFAIT 244
           EYA  L K G  E+ N  P+GTGPF F  YQKD+ IRY  N  YW  +  K+D+L+FAIT
Sbjct: 186 EYAAQLLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLVFAIT 245

Query: 245 PDAAVRLQKLKAGECHLMPYPAPADLSTIRADKNLKLDEQPGLNVAYFAYNTTVAPFDKP 304
           PDAA RLQKLKAGEC +  YP PAD+  ++ D NL + +Q G N+ + AYN T  P D+ 
Sbjct: 246 PDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFLAYNVTHPPLDQL 305

Query: 305 EVRKALNMAMNKQAIIDAVFQGAGTVAKNPIPPTMWSYNDSIKDDAYDPEAAKKALEAAG 364
           +VR+AL+MA++K AII AV+Q AG +A+N +PP  WSY+ +IKD  YDP  AK  L+ AG
Sbjct: 306 KVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPYDPTKAKALLKEAG 365

Query: 365 V-KDLTMKIWAMPVQRPYMPNARRTAELIQSDFAKVGVKAEIVSFEWGEYLKKSTEVNRD 423
           V    T+ +WAM VQR   PNAR +A++IQ D+ KVG+KA IVS+EWGEY+K++     D
Sbjct: 366 VAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEWGEYIKRAKNGEHD 425

Query: 424 GAVILGWTGDNGDPDNFMGVLLSCAATGEGGANRAQWCNKEFSELLSKAKQTTDVAERTK 483
            A+I GWTGDNGDPDN++GVL SCAA    G+N A+WCN  + +L+ +AK + D  +R K
Sbjct: 426 -AMIYGWTGDNGDPDNWLGVLYSCAAV--KGSNYAKWCNPAYDKLVQQAKVSNDREQRIK 482

Query: 484 LYEQAQVIFKEQAPWATLAHSTQFVPMSAKVSGFTMSPLGDFTFENVDI 532
            Y+QAQ I KEQ P   +A+ST F P+  +V  F +SP G   F  V +
Sbjct: 483 WYQQAQKILKEQVPITPIANSTVFQPLRKEVKDFKISPFGLTPFYGVSL 531