Pairwise Alignments

Query, 534 a.a., dipeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  550 bits (1416), Expect = e-161
 Identities = 276/534 (51%), Positives = 370/534 (69%), Gaps = 14/534 (2%)

Query: 9   LIASALAMASAMPAMAKTFVYCSEASPEGFDPSPYTAGGTFDASAHPVYNRLTEFKKGTT 68
           L+ + L   +     A   V+CSE SP GFDP  YT G  FDASA  V+NRLT+F++G T
Sbjct: 10  LLGAGLLSGAPSAVAASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNRLTQFERGGT 69

Query: 69  EVEPGLAEKWDVSSDGLEYTFHLRKGVKFHSNDKFTPSRDFNADDVIFSYNRQGDTKNPW 128
            V PGLA KW+VS DG  YTFHLR+GVKFH+ D F PSR FNADDV+F++NR  D  NP+
Sbjct: 70  AVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNRMLDKDNPF 129

Query: 129 NQYIAGITYEYYNSMEMPSLIKEIVKVDDYTVKFVLTRPEAPFLANIAMPFASIVSKEYA 188
            +      + Y+  M M   I ++ K+D++TVKF L   +A F+ N+AM FASI S EYA
Sbjct: 130 RKAYP-TEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFASIQSAEYA 188

Query: 189 DTLEKAGTKEDFNNLPIGTGPFKFVAYQKDAVIRYQKNADYW-GDAPKIDDLIFAITPDA 247
           D L K G   D N  PIGTGPF F  YQKDA IR++ N DYW  +  KID+LIFAIT DA
Sbjct: 189 DQLLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLIFAITTDA 248

Query: 248 AVRLQKLKAGECHLMPYPAPADLSTIRADKNLKLDEQPGLNVAYFAYN--------TTVA 299
           +VR+QKLK  EC +  +P PAD+  ++ADKNL++ +Q G N+ Y AYN            
Sbjct: 249 SVRMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKIKGSNEAN 308

Query: 300 PFDKPEVRKALNMAMNKQAIIDAVFQGAGTVAKNPIPPTMWSYNDSIKDDAYDPEAAKKA 359
           P  + +VR+AL+MA++K+ II++V+QGAG +A N +PPT WSY+DSIKD A+DPE AK+ 
Sbjct: 309 PMAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAFDPEKAKQL 368

Query: 360 LEAAGVKDLT-MKIWAMPVQRPYMPNARRTAELIQSDFAKVGVKAEIVSFEWGEYLKKST 418
           L+ AG+K+ T + +WAMPVQRPY PNA+  AE++QSD+AK+G+KA+IVS+EWGEY+K+S 
Sbjct: 369 LKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEWGEYIKRS- 427

Query: 419 EVNRDGAVILGWTGDNGDPDNFMGVLLSCAATGEGGANRAQWCNKEFSELLSKAKQTTDV 478
           +    GA+++GW+GDNGDPDN++G L  C A    G N ++WC K + +L+ +AK T+D 
Sbjct: 428 KGGEQGAMLIGWSGDNGDPDNWLGTLYGCDAV--DGNNFSKWCYKPYDDLIKQAKATSDQ 485

Query: 479 AERTKLYEQAQVIFKEQAPWATLAHSTQFVPMSAKVSGFTMSPLGDFTFENVDI 532
           A+RT+LY++AQ I KEQ P   +AHST + PMSAKV  F +SP    +F  V +
Sbjct: 486 AKRTELYQKAQHILKEQVPITPIAHSTVYQPMSAKVKDFKISPFALNSFYGVSV 539