Pairwise Alignments

Query, 566 a.a., 30S ribosomal protein S1 from Agrobacterium fabrum C58

Subject, 561 a.a., 30S ribosomal protein S1 from Pseudomonas simiae WCS417

 Score =  525 bits (1352), Expect = e-153
 Identities = 255/545 (46%), Positives = 370/545 (67%), Gaps = 6/545 (1%)

Query: 9   DDFAALLEESFASNDLAEGYVAKGIVTAIEKDVAIVDV--GLKVEGRVPLKEFGAKSKDG 66
           + FA L EES  + +L  G +  G++  I+     V V  GLK E  +PL++F   + D 
Sbjct: 3   ESFAELFEESLKTLNLQAGSIITGVIVDIDYQARWVTVHAGLKSEALIPLEQFYNDAGDL 62

Query: 67  TLKVGDEVEVYVERIENALGEAVLSREKARREESWVKLEAKFEAGERVEGVIFNQVKGGF 126
           T+ VGDEV V ++ +E+  GE  LSREKA+R E W+ LEA F A E V+GVI  +VKGGF
Sbjct: 63  TINVGDEVHVALDSVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKGGF 122

Query: 127 TVDLDGAVAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDKRRGNIVVSRRTVLEESRAE 186
           TVD++G  AFLP S VD+RP+RD T L      F+++K+D++R N+VVSRR+VLE   + 
Sbjct: 123 TVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAENSA 182

Query: 187 QRSEIVQNLEEGQVVDGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEILNIGQQ 246
           +R  ++++L+EGQ V G+VKN+TDYGAFVDLGG+DGLLH+TDMAW+R+ HPSEI+N+G +
Sbjct: 183 EREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVGDE 242

Query: 247 VKVQIIRINQETHRISLGMKQLESDPWDGISAKYPVGKKISGTVTNITDYGAFVELEPGI 306
           + V++++ ++E +R+SLG+KQL  DPW  I A+YP   +++  VTN+TDYG F ELE G+
Sbjct: 243 IDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPESTRVTARVTNLTDYGCFAELEEGV 302

Query: 307 EGLIHISEMSWTKKNVHPGKILSTSQEVDVVVLEVDPSKRRISLGLKQTLENPWQAFAFS 366
           EGL+H+SEM WT KN+HP K++    EV+V+VL++D  +RRISLG+KQ   NPW+ F+  
Sbjct: 303 EGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFSGQ 362

Query: 367 HPAGTEVEGEVKNKTEFGLFIGLEGDVDGMVHLSDLDWNRPGEQVIEEFNKGDVVKAVVL 426
              G ++ G +K+ T+FG+FIGL+G +DG+VHLSD+ WN  GE+ +  F KGD +  V+L
Sbjct: 363 FNKGDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTVIL 422

Query: 427 DVDVEKERISLGIKQLGKDAVGEAATSGDLRKNAVVSCEVIAVNDGGVEVKLVNHEDITS 486
            VD E+ERISLGIKQL  D   E     D  K A+V   V  V+  G  + L   +DI +
Sbjct: 423 SVDPERERISLGIKQLESDPFSEYVQEND--KGAIVKGTVKEVDAKGAIIVLA--DDIEA 478

Query: 487 FIRRNDLARDRDDQRPERFAVGQVFDARVVNFSKKDRKVMLSIKALEIAEEKEAVAQFGS 546
            ++ ++++RDR +        GQ  +A++++  +K R + LSIK+ +  EEKEA+    S
Sbjct: 479 TLKASEISRDRVEDARNVLKEGQEVEAKIISVDRKSRVIQLSIKSKDEVEEKEAIQSLKS 538

Query: 547 SDSGA 551
           +   A
Sbjct: 539 APEAA 543