Pairwise Alignments

Query, 566 a.a., 30S ribosomal protein S1 from Agrobacterium fabrum C58

Subject, 861 a.a., putative transcriptional accessory protein from Pseudomonas putida KT2440

 Score = 63.2 bits (152), Expect = 4e-14
 Identities = 29/82 (35%), Positives = 55/82 (67%), Gaps = 1/82 (1%)

Query: 190 EIVQNLEEGQVVDGVVKNITDYGAFVDLG-GIDGLLHVTDMAWRRVNHPSEILNIGQQVK 248
           E +++LE G +++GVV N+T++GAFVD+G   DGL+H++ ++ + V  P E +  G  VK
Sbjct: 728 EDLKDLEPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPREAVKAGDVVK 787

Query: 249 VQIIRINQETHRISLGMKQLES 270
           V+++ ++    R+ L M+  ++
Sbjct: 788 VKVMEVDIPRKRVGLSMRMSDT 809



 Score = 50.1 bits (118), Expect = 4e-10
 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 283 GKKISGTVTNITDYGAFVELEPGIEGLIHISEMSWTKKNVHPGKILSTSQEVDVVVLEVD 342
           G  + G VTN+T++GAFV++    +GL+HIS +S  K    P + +     V V V+EVD
Sbjct: 736 GMILEGVVTNVTNFGAFVDIGVHQDGLVHISALS-EKFVKDPREAVKAGDVVKVKVMEVD 794

Query: 343 PSKRRISLGLKQT 355
             ++R+ L ++ +
Sbjct: 795 IPRKRVGLSMRMS 807



 Score = 48.9 bits (115), Expect = 8e-10
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 370 GTEVEGEVKNKTEFGLFIGLEGDVDGMVHLSDLDWNRPGEQVIEEFNKGDVVKAVVLDVD 429
           G  +EG V N T FG F+ +    DG+VH+S L   +  +   E    GDVVK  V++VD
Sbjct: 736 GMILEGVVTNVTNFGAFVDIGVHQDGLVHISALS-EKFVKDPREAVKAGDVVKVKVMEVD 794

Query: 430 VEKERISLGIKQLGKDAVGE 449
           + ++R+ L ++    D  GE
Sbjct: 795 IPRKRVGLSMRM--SDTPGE 812



 Score = 34.7 bits (78), Expect = 2e-05
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 15/97 (15%)

Query: 23  DLAEGYVAKGIVTAIEKDVAIVDVGLKVEGRV---PLKEFGAKSKDGTLKVGDEVEVYVE 79
           DL  G + +G+VT +    A VD+G+  +G V    L E   K     +K GD V+V V 
Sbjct: 732 DLEPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPREAVKAGDVVKVKVM 791

Query: 80  RIENALGEAVLSREKARREESWVKLEAKFEAGERVEG 116
            ++              R+   + +      GE+VEG
Sbjct: 792 EVD------------IPRKRVGLSMRMSDTPGEKVEG 816