Pairwise Alignments

Query, 162 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 645 a.a., PAS domain-containing protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 57.0 bits (136), Expect = 6e-13
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 1/111 (0%)

Query: 50  VGYYTWNVGQNLVYLDAVTARLREFSPEEAAHGIPVEDFIAQIESGSRARVAKAVYNSLT 109
           VG + W++ +N V  D   AR+    PE A  G  +E F + +      RVA  +  ++T
Sbjct: 189 VGAWDWDIPENRVIADERFARMYGVDPEAAREGAAIEVFTSSVHPDDAERVADEIDQAMT 248

Query: 110 NGVFYDQEYRIRLKSSGFRWLRTTGRVILDGDRIPIMAMGTVRDVSAGKVL 160
               +  EYR+  +S   RW+   G+V  D +  PI   G   D++  K +
Sbjct: 249 GDGAFVSEYRLG-QSDDVRWILARGQVYFDAEGKPIRFPGVAVDITERKTI 298



 Score = 30.8 bits (68), Expect = 4e-05
 Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 15/103 (14%)

Query: 65  DAVTARLREFSPEEAAHGIPV-----EDFIAQIESGSRARVAKAVYNSLTNGVFYDQEYR 119
           D   AR  EF+      G+P+     E +     +  R R      NSL  G  Y+ EYR
Sbjct: 337 DYYNARWYEFT------GVPLGSTDGEGWNDMFHADDRERAWTVWRNSLETGEPYEIEYR 390

Query: 120 IRLKSSGFRWLRTTGRVILDGDRIPIMA--MGTVRDVSAGKVL 160
           ++  S  +RW  T GR +   D    +    GT+ D+   K L
Sbjct: 391 LKHHSGVYRW--TLGRAVAIRDEAGEITRWFGTLTDIDELKRL 431