Pairwise Alignments

Query, 508 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 585 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

 Score =  133 bits (334), Expect = 2e-35
 Identities = 141/516 (27%), Positives = 220/516 (42%), Gaps = 47/516 (9%)

Query: 7   AAVAVLILGLLKAWL-EKVAARLSFRAARAALSQRRFEALQAVAKV-----SPLDLSRTA 60
           A + VL  GL   W   +   +     A A L   R      VA++     +P + +R  
Sbjct: 54  AWLVVLAAGLTLCWAWRRQVEKAGISLAVAVLQGGRQHIGAQVAQLPLGWFTPDNTARLG 113

Query: 61  SGEAAGIVAEA---AEALVPYLSRFQPARMKATIVPLVFVLAILPFSWIAALVLLLAMPT 117
                G +A A   A  L P +S        +++ PLV ++A+        LV LLA+P 
Sbjct: 114 HVITQGTMAVAQLPAHVLTPLIS--------SSVTPLVLLVALFILHPPLGLVALLALPA 165

Query: 118 IP---LFMALIGWQAKAASEKQLAETGNINAFLLDRLRGLETIRTLKAVDLTAARLDADA 174
           +    LF A +G +A  A  +  A        +++  +    +R           L    
Sbjct: 166 LAAVLLFSARLGRRADHAFHQHFAAASQR---MVEFAQAQSVLRAFNGEGGGTRLLAQSL 222

Query: 175 QNLKKRTMAVLRIAFLSS-----AVLELFAAIGVAMTAVYIGFHLLGFLDFGAWGEKLTL 229
           +  +   M ++  A LS+     AV   FAA+ VA   ++ G          A G+    
Sbjct: 223 ERQRSSGMGLIIRASLSALLNSWAVQATFAALLVA-AGLWFGDQ--------AGGQAQDA 273

Query: 230 AEGLFILLLAPAFFEPLRELSAVWHDRAAGEASLNALATLTAGGAAIVGEGADVVRAPSS 289
              +  L+L   F +PL+++++           L  +  + A  A  + E A   R    
Sbjct: 274 VAVIVALVLVCRFIDPLQDVASHVEILRGAHGQLQEIERILA--AKPLPEPASPHRPVG- 330

Query: 290 TPGLLEMENLSFAY-PNAPPVIRNFNLTVQQGERVAILGASGCGKSTILSLIAGLAEAGE 348
             G + ++ +S  Y P  P V++N NL +  G   A++GASG GK++++ LIA   +  E
Sbjct: 331 --GAINLQGVSLRYNPTGPDVLQNVNLHIPAGSMTAVIGASGSGKTSLMRLIARFFDTTE 388

Query: 349 GVIRIGGVTLDDATADGLRGTIGWVSQKPFFFAASMKANIGFGRLAVSEAMVEEVLHRTG 408
           G +RIGGV +       L  T+  V Q  + F  S+  NI  G+   S+A V +  H  G
Sbjct: 389 GSVRIGGVDVRQMARASLTDTVSQVLQDTWLFQGSIADNIRIGKPDASDAEVLQAAHMAG 448

Query: 409 LDGLTQARR---HLQIGDGGNGISGGEAVRLAIARAFADPATQLVLADEPTAHLDRETAA 465
           L    +  R      +G+GG  +SGGE  R+ IARA    A  ++L DE TA LD E  A
Sbjct: 449 LGHTLERLRGGLDTSVGEGGAQLSGGERQRVTIARALIRQA-PVLLVDEATAALDAENQA 507

Query: 466 LVTDNLLQLAKGRTLIVATHDPVLAARMDRIVDMTA 501
           ++   L  L    TL+V  H     A  D IV + A
Sbjct: 508 VIAQTLHSLHGRCTLVVIAHQLSTVAMADHIVVLDA 543