Pairwise Alignments

Query, 295 a.a., glycine betaine ABC transporter permease from Agrobacterium fabrum C58

Subject, 698 a.a., glycine betaine ABC transporter, ATPase/permease fusion protein from Pseudomonas putida KT2440

 Score =  199 bits (507), Expect = 1e-55
 Identities = 117/287 (40%), Positives = 176/287 (61%), Gaps = 5/287 (1%)

Query: 4   LFKFPTMNDDALRALKKVIDEGFRGFTR-TYGGAIEGLFTPLQSFLIWAERLLIGAPWPV 62
           L +FP+  D  L A   +  +   G+++ T+  A  G+   +++ +   E  L   PWPV
Sbjct: 412 LVQFPSDRDSMLAAAGAI--DALIGWSQVTFESAFVGVIVAVRTVINGVEGALGWIPWPV 469

Query: 63  VILIVGALAWFASRSATIVSLCCGILFAIGWFGMWEDTMKTVSMIFVCAVMSIVIGLPIG 122
             L +  LAW  S  A +       L  IG FG WE T+ T++++    ++S++IG+P G
Sbjct: 470 PALALVYLAW-RSAGAILALTTALALGYIGLFGFWERTISTIALVGASVLLSLLIGIPTG 528

Query: 123 IAMARSNRLQNVVNPVLDVMQTMPSFVYLIPVVMLLGIGRVPGVIAVIIYAIPPMIRLTN 182
           I +A+    + +V P+LDVMQT+P+FVYLIP V    +G+ P VIA +I+A+ PMIRLT 
Sbjct: 529 ILLAKRALARRLVTPLLDVMQTLPTFVYLIPAVAFFSVGKTPAVIATVIFALAPMIRLTA 588

Query: 183 LGIRMVDHDVLEAADAFGSSKRQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIGV 242
           LGI+ V    +EAA A G++  Q L +V+LPLA  +++ G+NQTI+M+L+MVV+A++IG 
Sbjct: 589 LGIQEVPKAAVEAAVAHGATPWQTLTRVELPLASGSLLLGVNQTIVMSLSMVVVAALIGA 648

Query: 243 QGLGQPVLKAIANQYFTLGVFNGLAIVGIAIIFDRISQAYGLRLQKH 289
            GLG  V+ A+ N     GV  G+AIV  A++ DRI QA  LR + H
Sbjct: 649 GGLGYDVMTALRNIKGGEGVLAGIAIVFCALVPDRIIQA-SLRKRHH 694