Pairwise Alignments

Query, 295 a.a., glycine betaine ABC transporter permease from Agrobacterium fabrum C58

Subject, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

 Score = 82.8 bits (203), Expect = 7e-21
 Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 2/151 (1%)

Query: 106 MIFVCAVMSIVIGLPIGIAMARSNRLQNVVN--PVLDVMQTMPSFVYLIPVVMLLGIGRV 163
           ++      ++ +G+P GIA++R +R+          +V  T+P    L   + +LGIG  
Sbjct: 58  LVLASMAAALAVGIPAGIALSRPHRVDKAERFMQFFNVGNTIPPLAVLAIALSILGIGAG 117

Query: 164 PGVIAVIIYAIPPMIRLTNLGIRMVDHDVLEAADAFGSSKRQKLFKVQLPLALPTIMAGI 223
           P + A+ + ++ P++R T  G++ V   + EAA   G + RQ+L++V+LP A+P I+ G+
Sbjct: 118 PAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPRQQLWQVELPNAVPIIVGGV 177

Query: 224 NQTIMMALAMVVIASMIGVQGLGQPVLKAIA 254
              + + +    +A +IG   LG  +   IA
Sbjct: 178 RVALALNVGTAPLAFLIGANSLGSLIFPGIA 208