Pairwise Alignments

Query, 295 a.a., glycine betaine ABC transporter permease from Agrobacterium fabrum C58

Subject, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

 Score =  185 bits (469), Expect = 1e-51
 Identities = 95/217 (43%), Positives = 143/217 (65%)

Query: 62  VVILIVGALAWFASRSATIVSLCCGILFAIGWFGMWEDTMKTVSMIFVCAVMSIVIGLPI 121
           V+I +  ALA F  R   + +        I   G W++TM+T++ +    V+ +VIG+P+
Sbjct: 53  VLIALFAALAHFIQRKWALTAFVALSFLLILNLGYWQETMETLAQVTFATVVCVVIGVPL 112

Query: 122 GIAMARSNRLQNVVNPVLDVMQTMPSFVYLIPVVMLLGIGRVPGVIAVIIYAIPPMIRLT 181
           GI  A        + PVLD+MQT+P+FVYLIP + L G+G VPG+I+ +++AI   IRLT
Sbjct: 113 GILAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLT 172

Query: 182 NLGIRMVDHDVLEAADAFGSSKRQKLFKVQLPLALPTIMAGINQTIMMALAMVVIASMIG 241
            LGI  V  ++++A  AFG S+RQ L +++LP A+P+I AG+ Q IM++L+MVVIA+++G
Sbjct: 173 YLGICDVPQELMDAGKAFGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVG 232

Query: 242 VQGLGQPVLKAIANQYFTLGVFNGLAIVGIAIIFDRI 278
             GLG+PV+ A+     +LG   GLAIV +AI+ DRI
Sbjct: 233 ADGLGKPVVNALNTADISLGFEAGLAIVLLAIMLDRI 269