Pairwise Alignments

Query, 338 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 318 a.a., galactofuranose ABC transporter substrate-binding protein YtfQ from Escherichia coli ECRC62

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 33/308 (10%)

Query: 5   KMLLASAAVACAALPITAHADTSAKKIALSNNYAGNSWRQAMLTSWDKITKQAVADKQ-- 62
           K LL  +AV+ A   +++ A  +   +  S   + + WR A     +    ++ A+K+  
Sbjct: 3   KRLLVVSAVSAA---MSSMALAAPLTVGFSQVGSESGWRAA-----ETNVAKSEAEKRGI 54

Query: 63  -VAAADAFTTAENQATEQAAQIQNLILQGYDAIVINAASPTALNGAVKEACDAGITVVSF 121
            +  AD     ENQ       +++ + QG DAI I     T     +KEA DA I V   
Sbjct: 55  TLKIADGQQKQENQIKA----VRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLL 110

Query: 122 DGI--VTEPCAWRIAVDFKAMGESQI--DYLAKAMP-KGGNLLEIRGLAGVSVDDEIHAG 176
           D    V +   +   V    + E ++  D+L K +  K  N++E++G  G SV  +   G
Sbjct: 111 DRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKG 170

Query: 177 IAAGVAKNPQFKIVGSVNGDWAQDVAQRAVAGILPSL---PEVAAVVTQGGD-GYGAAQA 232
            A  +   P  KI+ S +GD+ +   +  +   + +      +  V     D   GA QA
Sbjct: 171 FAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQA 230

Query: 233 F-AAAKRPTPTIVMGNREDELQWWKQQKDASGYETMSVSIAPGVSTLAFWVAQQILDGKD 291
              A  +P   I+ G+ +     +K   D  G    SV + P ++  AF   ++      
Sbjct: 231 IKEAGLKPGKDILTGSIDGVPDIYKAMID--GEANASVELTPNMAGPAFDALEK------ 282

Query: 292 VKKDLTVP 299
            KKD T+P
Sbjct: 283 YKKDGTMP 290