Pairwise Alignments

Query, 313 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

 Score = 91.3 bits (225), Expect = 3e-23
 Identities = 70/305 (22%), Positives = 137/305 (44%), Gaps = 9/305 (2%)

Query: 2   KLSANALRLIIPAASLAF--LLAAVFYMQPRAMSYTGMNLLFNLAVPI---ALATIAQML 56
           +L  N  RL+   A   F  L+     M   + ++   + L N+A  +   A+  +    
Sbjct: 18  RLRLNLARLVRSPAFYPFVGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTC 77

Query: 57  IMSVNDLDLSMGTFVSFCACVTATFLQTSPLTGIAIFAGAIAVYAV---LGAVIHIRNLP 113
           ++    +DLS+G  ++    +TA  +      G+AI AG +   A     G  +   ++P
Sbjct: 78  VILTGGIDLSVGPVMALSGTLTAGLMVAGLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMP 137

Query: 114 SIVVTLGMSFVWGGLAVLILPS-PGGQAPAFIRTLMTAKPPFVPIAIVASILIAVVAHYI 172
            I+VTL    +  GL ++     P    P +           + + I+  +L  +VA+ +
Sbjct: 138 PIIVTLATMGIARGLGLMYTDGYPISGLPDWFAFFGRESLFGIQVPILIMLLTYLVAYVL 197

Query: 173 VMRSSFGVLMRGVGGNFRSVERSGWSVVGIRAATFALAGFFAVLSGIALVGLTTAADANI 232
           +  +  G  +  +GGN  +V  SG      +   + ++G  A ++G+ L     +   N 
Sbjct: 198 LQHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNA 257

Query: 233 ALRYTLLSIAGVILGGGEFVGGRVSPIGAVIGALTLTLAGSFLSFMRISPDWQIGAQGAI 292
            + + L +IA V+LGG    GGR   +G ++GA+ L +  + L+ + +SP  Q   +G I
Sbjct: 258 GVSFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGI 317

Query: 293 LIIVL 297
           +++ +
Sbjct: 318 ILLAI 322