Pairwise Alignments

Query, 313 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 322 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 83/305 (27%), Positives = 143/305 (46%), Gaps = 13/305 (4%)

Query: 10  LIIPAASLAFLLAAVFYMQPRAMSYTGMNLLFNLAVPIALATIAQMLIM--SVNDLDLSM 67
           L I   + AFLL     + P     + +  L  +A  + +    Q L++      +DLS+
Sbjct: 16  LTIAIGASAFLLLVGELLSPGFAQGSQIVRLLTIAAILGIVAAGQNLVILGGREGIDLSV 75

Query: 68  GTFVSFCACVTATFL--QTSPLTGIAIFAGAIA--VYAVLGAVIHIRNLPSIVVTLGMSF 123
           G  +S  A +    +  Q + +    + AG I   +  + G  I    +P +V+TLGM+ 
Sbjct: 76  GAMISLGAVLAGNMMNGQNAGIPLAILVAGGIPFLIGLINGLGITFVRIPPLVMTLGMTA 135

Query: 124 V-WGGLAVLILPSPGGQAPAFIRTLMTAKPPF-VPIAIVASILIAVVAHYIVMRSSFGVL 181
           V  GGL V     P G A   +   +     F +P  +   + IA +  +++ R++FG  
Sbjct: 136 VIQGGLVVYSQGVPSGAAAPLLAGFINRPLIFGIPGVLFVWLGIAAIMLFVLRRTAFGFA 195

Query: 182 MRGVGGNFRSVERSGWSVVGIRAATFALAGFFAVLSGIALVGLTTAADANIALRYTLLSI 241
           +  +G N R+    G  V  IR   + L+G FA L+G+ ++G T  +  ++  +Y L SI
Sbjct: 196 IYAIGSNERAATLVGLPVPLIRTLLYGLSGLFAGLTGVCVIGYTGTSFISVGDQYVLPSI 255

Query: 242 AGVILGGGEFVGGRVSPIGAVIGALTLTLAGSFLSFMRISPDWQIGAQGAIL-IIVLALR 300
             V++GG    GG    +G + GA+ LT+  S L    I+ +  + A+  I  + +LAL 
Sbjct: 256 IAVVIGGTSLAGGAGGYVGTMAGAVALTILQSVL----ITLNLDVWARQIIFGVTLLALM 311

Query: 301 ILLNR 305
           +L  R
Sbjct: 312 LLYGR 316