Pairwise Alignments

Query, 313 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 314 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  123 bits (308), Expect = 6e-33
 Identities = 91/303 (30%), Positives = 141/303 (46%), Gaps = 10/303 (3%)

Query: 11  IIPAASLAFLLAAVFYMQPRAMSYTGMNLLFNLAVPIALATIAQMLIMSVNDLDLSMGTF 70
           II    LA L+A   ++QP  +  + +       +P+ L  I Q  ++   D+DLS+G+ 
Sbjct: 13  IITLVVLAVLVAVNTFLQPSFVQPSVLQSNLTTFLPLILVAIGQTYVILAGDIDLSVGSI 72

Query: 71  VSFCACVTATFLQTSPLTGIAIFAGAIAVYAV-------LGAVIHIRNLPSIVVTLGMSF 123
           V+    VT + +     T  A+FAG  A  AV        G  I       IV T     
Sbjct: 73  VALANVVTVSVVAALGGTTGAVFAGMAAGAAVGLLCGLVNGLFISGLRFQPIVTTFATGI 132

Query: 124 VWGGLAVLILPSPGGQAPAFIRTLMTAKPPFVPIAIVASILIAVVAH-YIVMRSSFGVLM 182
           ++ GLA+ +LP  G   P       T    FV +  V  +LI  +A   IV R  F   +
Sbjct: 133 IFAGLAIWVLPQAGLPVPEAY--WQTYSGSFVGLPFVLWVLIGGIAFTLIVSRIPFHTHL 190

Query: 183 RGVGGNFRSVERSGWSVVGIRAATFALAGFFAVLSGIALVGLTTAADANIALRYTLLSIA 242
             VGGN     ++G  + GIR   + ++G F+ L+ + L G T + D  +     L SI+
Sbjct: 191 LAVGGNRTGAFQTGLRLSGIRIGAYMISGLFSALAALCLTGETASGDPLLGASLALSSIS 250

Query: 243 GVILGGGEFVGGRVSPIGAVIGALTLTLAGSFLSFMRISPDWQIGAQGAILIIVLALRIL 302
            V+LGG    GG  S  G++ GAL L + G+ + F  +  ++Q   QG I++  LA  +L
Sbjct: 251 AVVLGGTALSGGFGSSTGSIAGALVLGMIGNVIFFAGLPFEYQTLVQGLIVLTALAGGVL 310

Query: 303 LNR 305
           + R
Sbjct: 311 VTR 313