Pairwise Alignments

Query, 313 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 348 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 78/308 (25%), Positives = 139/308 (45%), Gaps = 19/308 (6%)

Query: 9   RLIIPAASLAFLLAAVFYMQPRAMS--------YTGMNLLFNLAVPIALATIAQMLIMSV 60
           RL    A+L  +LAA+  + P  +         Y  +  +   A P+AL TI   L+++ 
Sbjct: 11  RLAPQLAALFIILAAITIISPGFLDVSLQNGRLYGSLIDILVRAAPVALLTIGMTLVIAT 70

Query: 61  NDLDLSMGTFVSFCACVTATFLQTS---PLTGIAIFAGAIAVYAVLGAVIHIRNLPSIVV 117
             +DLS+G  ++ C  V AT +      P       A  IA     G ++ + ++  I+ 
Sbjct: 71  KGIDLSIGAVIAICGAVAATLISNGHSIPAVLAVSLAVGIACGLWNGVLVALLDIQPIIA 130

Query: 118 TLGMSFVWGGLAVLILPSPGGQAPAF----IRTLMTAKPPFVPIAIVASILIAVVAHYIV 173
           TL +     G+A LI     G    F       + +     VP+ ++  +  A+V   +V
Sbjct: 131 TLILMVAGRGIAQLITE---GVILTFNDDGFAAIGSGSFAGVPLPVIIWVAAALVIGVLV 187

Query: 174 MRSSFGVLMRGVGGNFRSVERSGWSVVGIRAATFALAGFFAVLSGIALVGLTTAADANIA 233
            +S+ G L+   G N R+   +G     +    +A++G  A ++G+ +      ADAN A
Sbjct: 188 RKSALGFLIEATGINRRAAALAGVRARFLLFFVYAVSGLCAAIAGMIVTADIRGADANNA 247

Query: 234 -LRYTLLSIAGVILGGGEFVGGRVSPIGAVIGALTLTLAGSFLSFMRISPDWQIGAQGAI 292
            L   L +I  V++GG    GGR S   ++IGAL +    + +      P++ +  +  I
Sbjct: 248 GLWLELDAILAVVIGGTSLNGGRFSITASLIGALIIQTINTGILVSGFPPEFNLIIKAGI 307

Query: 293 LIIVLALR 300
           +++VL L+
Sbjct: 308 IMVVLTLQ 315