Pairwise Alignments

Query, 315 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 341 a.a., ABC transporter permease from Variovorax sp. OAS795

 Score =  111 bits (277), Expect = 3e-29
 Identities = 83/282 (29%), Positives = 137/282 (48%), Gaps = 14/282 (4%)

Query: 43  LTFAAFSVIVGIGQMFVITLGPGNIDLCVPATMTLSGTLALKFMDVSDSL-------ILP 95
           LT  AF  I+ +G  FVI    G IDL V +   L     + F++ +          ++ 
Sbjct: 62  LTRTAFIGIIAVGMCFVII--SGGIDLSVGSMAALIAGSVIMFINWAGPASGSPLMAVVM 119

Query: 96  GLLIAILIGIAIGIGNYALIKLLRIPPIIATLSMSFIVQSIAIWSNRGLRIKPPETL--- 152
           G ++A+++G   G+ +  LI   RI P I TL    I ++   +   G  +     L   
Sbjct: 120 GAVLAVVLGALFGLAHGLLITKGRIEPFIVTLGTLGIFRAYLTYFADGGALTLDNDLSDL 179

Query: 153 -ATFAISSSFGIPNVALVALLLSVIAWLLLDRTFYGRWIAAIGQSTFAARMTGIPVDGTR 211
            A    +S  GIP    V +++++I  ++L+RT YGR++ AIG +   AR   + VD  +
Sbjct: 180 YAPVYYASLAGIPVPVWVFVIVAIIGGVILNRTAYGRYVQAIGSNEQVARYAAVDVDRVK 239

Query: 212 FVTYVLCAVLAAIAGYLLASFSGGAALNMGSEYLLMSIAVVVIGGTAVSGGDSNVPGIWG 271
            +TYVL  V   IA  L     G A+   G  + L +IA V++GGTA+ GG  ++ G   
Sbjct: 240 ILTYVLLGVCVGIATLLYVPRLGSASPTTGLLWELEAIAAVIVGGTALKGGAGSITGTVV 299

Query: 272 ASLFMFLVVSMLN-TYGFGAGIRLILTGLIIISVILLASGRK 312
            ++ + ++ ++LN T      +   + G +II V  L  GR+
Sbjct: 300 GAILLSVISNILNLTSIISVYLNAAVQGFVIIIVAFLQRGRR 341