Pairwise Alignments

Query, 315 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 330 a.a., sugar ABC transporter permease from Pseudomonas fluorescens SBW25

 Score =  131 bits (329), Expect = 3e-35
 Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 10/312 (3%)

Query: 4   LSSFTRKPWIWSFAATAAVWIITVLFTGG-ASSFGLSHAALTFAAFSVIVGIGQMFVITL 62
           L+   R P  + F     V ++ +L +    ++  LS+ A    + + I+ +G   VI  
Sbjct: 23  LARLVRSPAFYPFVGLVVVTVVMILASDTFLTASNLSNIARQ-VSINAIIAVGMTCVILT 81

Query: 63  GPGNIDLCVPATMTLSGTLALKFMDVSDSLILPGLLIA--ILIGIAIGIGNYALIKLLRI 120
           G   IDL V   M LSGTL    M      + PGL I   +LIG+A GIGN   +  L +
Sbjct: 82  G--GIDLSVGPVMALSGTLTAGLMVAG---LPPGLAIGAGMLIGVAFGIGNGLFVAYLHM 136

Query: 121 PPIIATLSMSFIVQSIAIWSNRGLRIKP-PETLATFAISSSFGIPNVALVALLLSVIAWL 179
           PPII TL+   I + + +    G  I   P+  A F   S FGI    L+ LL  + A++
Sbjct: 137 PPIIVTLATMGIARGLGLMYTDGYPISGLPDWFAFFGRESLFGIQVPILIMLLTYLAAYV 196

Query: 180 LLDRTFYGRWIAAIGQSTFAARMTGIPVDGTRFVTYVLCAVLAAIAGYLLASFSGGAALN 239
           LL  T  GR+I AIG +  A R++G+     + + Y +  + AAIAG +L S       N
Sbjct: 197 LLQHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPN 256

Query: 240 MGSEYLLMSIAVVVIGGTAVSGGDSNVPGIWGASLFMFLVVSMLNTYGFGAGIRLILTGL 299
            G  + L +IA VV+GG +++GG   + G    ++ + ++ + LN  G    ++ ++ G 
Sbjct: 257 AGVSFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGG 316

Query: 300 IIISVILLASGR 311
           II+  I ++  R
Sbjct: 317 IILLAIFISRQR 328