Pairwise Alignments

Query, 315 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 321 a.a., ribose ABC transporter permease from Serratia liquefaciens MT49

 Score =  116 bits (290), Expect = 8e-31
 Identities = 78/306 (25%), Positives = 151/306 (49%), Gaps = 11/306 (3%)

Query: 10  KPWIWSFAATAAVWI-ITVLFTGGASSFGLSHA--ALTFAAFSVIVGIGQMFVITLGPGN 66
           K W+    +  A+ + I V+ +   + F L++    L   + + I+ +G   VI      
Sbjct: 13  KEWLLEQKSLIALLVLIAVVSSMSPNFFTLNNLFNILQQTSVNAIMAVGMTLVILTS--G 70

Query: 67  IDLCVPATMTLSGTLALKFMDVSDSLILPGLLIAILIGIAIGIGNYALIKLLRIPPIIAT 126
           IDL V + + L+G +A   +    + ++  +  A+ +G A+G     ++   ++   IAT
Sbjct: 71  IDLSVGSLLALTGAVAASIVGFEVNAVV-AVAAALALGAAVGACTGVIVAKGKVQAFIAT 129

Query: 127 LSMSFIVQSIAIWSNRGLRIKP-----PETLATFAISSSFGIPNVALVALLLSVIAWLLL 181
           L M  +++ + +    G  +        +T   F I    G+P    +  ++ + AW +L
Sbjct: 130 LVMMLLLRGVTMVYTNGSPVNTGFTDVADTFGWFGIGRPLGVPTPIWIMAIVFIAAWYML 189

Query: 182 DRTFYGRWIAAIGQSTFAARMTGIPVDGTRFVTYVLCAVLAAIAGYLLASFSGGAALNMG 241
             T  GR+I A+G +  A R++GI VD  + + Y LC +LAA+AG +  +    A    G
Sbjct: 190 HHTRLGRYIYALGGNEAATRLSGISVDKVKIIVYSLCGLLAALAGVIEVARLSSAQPTAG 249

Query: 242 SEYLLMSIAVVVIGGTAVSGGDSNVPGIWGASLFMFLVVSMLNTYGFGAGIRLILTGLII 301
           + Y L +IA VV+GGT+++GG   + G    +L +  + + LN  G  +  ++I+  ++I
Sbjct: 250 TGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVI 309

Query: 302 ISVILL 307
           +  +L+
Sbjct: 310 LLAVLV 315