Pairwise Alignments

Query, 315 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 321 a.a., Ribose import permease protein RbsC from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  112 bits (280), Expect = 1e-29
 Identities = 80/315 (25%), Positives = 156/315 (49%), Gaps = 12/315 (3%)

Query: 1   MNGLSSFTRKPWIWSFAATAAVWI-ITVLFTGGASSFGLSHA--ALTFAAFSVIVGIGQM 57
           ++G   FT K W+    +  A+ + I ++ T   + F +++    L   + + I+ +G  
Sbjct: 6   VSGRRYFT-KAWLMEQKSLIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMT 64

Query: 58  FVITLGPGNIDLCVPATMTLSGTLALKFMDVSDSLILPGLLIAILIGIAIGIGNYALIKL 117
            VI      IDL V + + L+G +A   + +  + ++  +  A+ +G AIG     ++  
Sbjct: 65  LVILTS--GIDLSVGSLLALTGAVAASIVGIEVNALV-AVAAALALGAAIGAVTGVIVAK 121

Query: 118 LRIPPIIATLSMSFIVQSIAIWSNRGLRIKPPET-----LATFAISSSFGIPNVALVALL 172
            R+   IATL M  +++ + +    G  +    T        F I    G+P    +  +
Sbjct: 122 GRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGI 181

Query: 173 LSVIAWLLLDRTFYGRWIAAIGQSTFAARMTGIPVDGTRFVTYVLCAVLAAIAGYLLASF 232
           + + AW +L  T  GR+I A+G +  A R++GI V+  + + Y LC +LA++AG +  + 
Sbjct: 182 VFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVAR 241

Query: 233 SGGAALNMGSEYLLMSIAVVVIGGTAVSGGDSNVPGIWGASLFMFLVVSMLNTYGFGAGI 292
              A    G+ Y L +IA VV+GGT+++GG   + G    +L +  + + LN  G  +  
Sbjct: 242 LSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYY 301

Query: 293 RLILTGLIIISVILL 307
           ++I+  ++I+  +L+
Sbjct: 302 QMIVKAVVILLAVLV 316