Pairwise Alignments

Query, 315 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 328 a.a., L-arabinose ABC transporter permease AraH from Dickeya dianthicola ME23

 Score =  108 bits (270), Expect = 2e-28
 Identities = 81/290 (27%), Positives = 150/290 (51%), Gaps = 8/290 (2%)

Query: 20  AAVWIITVLFTGGASSFGLSHAALTFAAFSVIVGIGQMFVITLGPGNIDLCVPATMTLSG 79
           AA+++  +LF    ++F          + S +V  G +F   L  G+ DL V + +  +G
Sbjct: 32  AALFLACMLFVPNFATFVNMKGLGLAISMSGMVACGMLFC--LASGDFDLSVASVIACAG 89

Query: 80  TLALKFMDVSDSLILPGLLIAILIGIAIGIGNYALIKLLRIPPIIATLSMSFIVQSIAIW 139
                 ++VS+SL L G+   +L+G+A G+ N  +I  L+I  +I TL+   IV+ +A  
Sbjct: 90  VTTAVVINVSESLWL-GVGAGLLLGVAFGLLNGFVIAQLKINALITTLATMQIVRGLAYI 148

Query: 140 SNRGLRIK-PPETLATFAISSSFGIPNVALVALLLSVIAWLLLDRTFYGRWIAAIGQSTF 198
            + G  +    E   T   ++  G+P    + ++  V+  LLL++T +GR   AIG +  
Sbjct: 149 ISDGKAVGIEDERFFTLGYANWLGLPAPIWLTVICMVLFGLLLNKTTFGRNTLAIGGNEE 208

Query: 199 AARMTGIPVDGTRFVTYVLCAVLAAIAGYLLAS--FSGGAALNMGSEYLLMSIAVVVIGG 256
           AAR+ G+PV  T+ + + L  +++A AG +LAS   SG    ++G  Y L+ I+  V+GG
Sbjct: 209 AARLAGVPVVRTKIIIFGLSGLVSAAAGIILASRMTSGQPMTSIG--YELIVISACVLGG 266

Query: 257 TAVSGGDSNVPGIWGASLFMFLVVSMLNTYGFGAGIRLILTGLIIISVIL 306
            ++ GG   +  +    L +  V + +N        + ++ GLI+++ ++
Sbjct: 267 VSLKGGIGKISYVVAGVLILGTVENAMNLLNISPFAQYVVRGLILLAAVV 316