Pairwise Alignments

Query, 315 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 349 a.a., D-allose transport system permease protein AlsC from Azospirillum sp. SherDot2

 Score =  123 bits (308), Expect = 7e-33
 Identities = 85/271 (31%), Positives = 135/271 (49%), Gaps = 13/271 (4%)

Query: 46  AAFSVIVGIGQMFVITLGPGNIDLCVPATMTLSGT--------LALKFMDVSDSLILPGL 97
           + + V+V +GQM V+  G    DL V AT+ L+          L   F DV   +I  G 
Sbjct: 69  SVYLVLVSLGQMMVLITG--GFDLAVGATVALTSVVSALAMAALGQMFPDVPILVIALGA 126

Query: 98  LIAILIGIAIGIGNYALIKLLRIPPIIATLSMSFIVQSIAIWSNRGLRIK--PPETLATF 155
           L    +   +G+ N A + L  + P I TL +S +    +++   G+ +   P E    F
Sbjct: 127 LAGFAVAALVGLANGAGVALFGVSPFIMTLGVSSVAAGGSLFLTGGVPVSGLPAEFADLF 186

Query: 156 AISSSFGIPNVALVALLLSVIAWLLLDRTFYGRWIAAIGQSTFAARMTGIPVDGTRFVTY 215
                 GIP   LVA +   IAW+++ RT  G  + A+G +  AA+++ I    T  V Y
Sbjct: 187 GFGRWLGIPVPVLVAAVAVAIAWVVMTRTRTGAHLYAVGGNIKAAKLSAIHTGRTLIVAY 246

Query: 216 VLCAVLAAIAGYLLASFSGGAALNMGSEYLLMSIAVVVIGGTAVSGGDSNVPGIWGASLF 275
           VLCA++AA+ G LL +       N+G    L SIA  VI G ++ GG   V  +   + F
Sbjct: 247 VLCALIAALTGLLLTARVESGEANLGGTLALESIAACVIAGVSLRGGIGRVETVVLGAFF 306

Query: 276 MFLVVSMLNTYGFGAGIRLILT-GLIIISVI 305
           + LV + +N    G+ ++++L  GL+I++VI
Sbjct: 307 IVLVQNGMNLAQIGSYLQMVLLGGLLILAVI 337