Pairwise Alignments

Query, 315 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 322 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

 Score =  133 bits (334), Expect = 6e-36
 Identities = 96/314 (30%), Positives = 159/314 (50%), Gaps = 2/314 (0%)

Query: 4   LSSFTRKPWIWSFAATAAVWIITVLFTGGASSFGLSHAALTFAAFSVIVGIGQMFVITLG 63
           L +    P   +  A+A + ++  L + G +        LT AA   IV  GQ  VI  G
Sbjct: 8   LKTIITDPLTIAIGASAFLLLVGELLSPGFAQGSQIVRLLTIAAILGIVAAGQNLVILGG 67

Query: 64  PGNIDLCVPATMTLSGTLALKFMDVSDSLILPGLLIAILIGIAIGIGNYALIKLLRIPPI 123
              IDL V A ++L   LA   M+  ++ I   +L+A  I   IG+ N   I  +RIPP+
Sbjct: 68  REGIDLSVGAMISLGAVLAGNMMNGQNAGIPLAILVAGGIPFLIGLINGLGITFVRIPPL 127

Query: 124 IATLSMSFIVQSIAIWSNRGLRIKPPETLATFAISSS--FGIPNVALVALLLSVIAWLLL 181
           + TL M+ ++Q   +  ++G+       L    I+    FGIP V  V L ++ I   +L
Sbjct: 128 VMTLGMTAVIQGGLVVYSQGVPSGAAAPLLAGFINRPLIFGIPGVLFVWLGIAAIMLFVL 187

Query: 182 DRTFYGRWIAAIGQSTFAARMTGIPVDGTRFVTYVLCAVLAAIAGYLLASFSGGAALNMG 241
            RT +G  I AIG +  AA + G+PV   R + Y L  + A + G  +  ++G + +++G
Sbjct: 188 RRTAFGFAIYAIGSNERAATLVGLPVPLIRTLLYGLSGLFAGLTGVCVIGYTGTSFISVG 247

Query: 242 SEYLLMSIAVVVIGGTAVSGGDSNVPGIWGASLFMFLVVSMLNTYGFGAGIRLILTGLII 301
            +Y+L SI  VVIGGT+++GG     G    ++ + ++ S+L T       R I+ G+ +
Sbjct: 248 DQYVLPSIIAVVIGGTSLAGGAGGYVGTMAGAVALTILQSVLITLNLDVWARQIIFGVTL 307

Query: 302 ISVILLASGRKATR 315
           ++++LL   +K  R
Sbjct: 308 LALMLLYGRQKQLR 321