Pairwise Alignments

Query, 315 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

Subject, 340 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  112 bits (280), Expect = 1e-29
 Identities = 87/317 (27%), Positives = 151/317 (47%), Gaps = 22/317 (6%)

Query: 9   RKPWIWSFAATAAVWIITVLFTGGASSFGLSHAALTFA---AFSVIVGIGQMFVITLGPG 65
           +K  I  FAA  +++ +  +F+  +++F   +  +T A       ++GIG   VI  G  
Sbjct: 17  QKDIIQKFAALGSLFALVAVFSATSNAFFTVNNGMTIALQVTSIALLGIGATCVIITG-- 74

Query: 66  NIDLCVPATMTLSGTLALKFMDVSDSLILPGLLIAILIGIAIGIGNYALIKLLRIPPIIA 125
            IDL V + + L+G +A   +      +  G+L+ IL G   G+ N  L+   ++PP IA
Sbjct: 75  GIDLSVGSVLALAGVVAALAVKELGMPVPIGMLLGILTGSLCGLINGLLVTRFKLPPFIA 134

Query: 126 TLSMSFIVQSIAIWSNRGLRIKP-PETLATFAISSSF----------------GIPNVAL 168
           TL M  I + +A+       +    E+       + F                GIP   +
Sbjct: 135 TLGMMLIARGVALQITGARAVSGLGESFGELGNGALFRIVTIGDDGFPNVVFPGIPYPVI 194

Query: 169 VALLLSVIAWLLLDRTFYGRWIAAIGQSTFAARMTGIPVDGTRFVTYVLCAVLAAIAGYL 228
           + +++++    +L+R+  GR I A+G +  AAR++G+ V      TY+L   LA + G +
Sbjct: 195 LMVVIALAVSFMLNRSILGRHIYAVGSNADAARLSGVNVARVTNFTYILSGTLAGLTGCV 254

Query: 229 LASFSGGAALNMGSEYLLMSIAVVVIGGTAVSGGDSNVPGIWGASLFMFLVVSMLNTYGF 288
           L S    A  N G  Y L +IA  VIGGT++ GG   + G    +  + ++ + LN  G 
Sbjct: 255 LMSRLVTAQPNEGVMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRNGLNMNGV 314

Query: 289 GAGIRLILTGLIIISVI 305
            A  + I+ GL+I+  +
Sbjct: 315 SAFTQQIIIGLVILVTV 331