Pairwise Alignments

Query, 294 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 298 a.a., permease from Agrobacterium fabrum C58

 Score =  122 bits (306), Expect = 1e-32
 Identities = 82/279 (29%), Positives = 137/279 (49%), Gaps = 16/279 (5%)

Query: 17  IFAAQDGISKHLGSAY--PPVFVAMLRYWAFAVFVL-LMAARSAGGIRGAVMANRPWLQI 73
           +    D I+K++  +    P  V   R++   +  L L+   S G +     A RPW+  
Sbjct: 10  VLPVMDAIAKYMAVSVGMSPAQVTFYRFFFQVLCTLPLLLVVSPGAL---FSAKRPWMNC 66

Query: 74  SRGVLLAVQIVFSIFSFAVVGLAHSHSILASAPLIVAALSMPLLGEHVGWRRWCAIFVGF 133
            RGVL A   +    +   + LA   +I    P ++  +S   LG+ VGW+RW AI VGF
Sbjct: 67  LRGVLHASASLMFFAAVKYMPLADVFAIYFVEPFMLTMMSALFLGDRVGWKRWTAIVVGF 126

Query: 134 IGVLVILKPDGDGFDNKLIITFVAAFMLALYSVLTRLGSKSDSAMTSFFYTGVAG----A 189
            G L++++P  + F    ++    AF   LY  L R    +DS +     +G+AG    A
Sbjct: 127 GGALIVIQPSFEIFGWTSLLPVACAFFYTLYLFLNRAIGDADSPLVMQTMSGIAGTLFMA 186

Query: 190 AAL----TLVGPFYWVPLAPQDWGWMLALCITGMSG--HYCLIKAFELADAASVQPFSYY 243
           AAL     L    + V L    +  +L + +  +SG  H  +++AF LA  + + PF Y+
Sbjct: 187 AALFAGDALGDKDFAVSLPQSAFALVLLVLLGSLSGYMHLLIVRAFRLAPLSLLAPFQYF 246

Query: 244 QLVLVSIIGVTIYGEVVTSNMVTGAAIVIAAGLFTIWRE 282
           +++  +I+G  ++ +  T +   G  I++A+GLF IWRE
Sbjct: 247 EIISATILGYALFSDFPTPSKWLGILIIVASGLFIIWRE 285