Pairwise Alignments

Query, 297 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 297 a.a., putative permease, DMT superfamily from Alteromonas macleodii MIT1002

 Score =  104 bits (260), Expect = 2e-27
 Identities = 87/296 (29%), Positives = 146/296 (49%), Gaps = 19/296 (6%)

Query: 7   AAVGAATCWAMTGLISARPAGHLGALAFNRTRQLFVASVLGLYVLASGTWRDLQPDALWA 66
           AA+G A CWA+   +          L  N  + L   ++L + VL       L   A+  
Sbjct: 5   AALGTALCWAIAARLFRGTGNAFSPLTMNFWKGLISIAILAV-VLVVVQPTGLSTHAVLW 63

Query: 67  LLLSGFIGIFVGDTLLFTCLNRLGPRRSGILFALNAPI-AAVLGWAILGEQLSATAVAGI 125
           LLLSG IGI +GDT  F  L  +G  ++ ++    AP+  A+   A +GE ++     G+
Sbjct: 64  LLLSGLIGIGIGDTCFFKALQSIGDSQAVLVAETLAPLFTALFAMAFIGEWITWQQWVGV 123

Query: 126 GLTLAGVLLAILFGKRKSQLHAWESVKGPLWLGVLFGLLAALSQAVGSLIARPVMASG-V 184
            + L  V + I   KR S  H + +       G L+G+ AAL QAVG++++R ++++G +
Sbjct: 124 AVVLFSVDMVIKVRKR-STTHVFAT------SGYLYGVGAALCQAVGAVVSRDILSAGEI 176

Query: 185 DPIAASMLR-VG-----VAAICLTALTMLPIKAVKPNGSLTVSIFLRTVLTGSIGLGFGM 238
           D  +A+ LR VG     V  I LT    +P+  +         ++   VL   +G    +
Sbjct: 177 DAASAAFLRLVGGMVFVVPLIALTKTRYMPV--INYESDSGKRVWPAFVLATLLGTTAAI 234

Query: 239 TLLLFALSGGKVGIVSTLSATTPVIILPLLWLRTGERPASGAWVGAALVVIGMALV 294
            L +FA +  K  +V TL AT+ ++ L + W+  GER      V +A+ ++G+A++
Sbjct: 235 YLQMFAFAYAKAAVVQTLIATSALMSLGVAWV-LGERATKATIVWSAVALVGVAIL 289



 Score = 25.0 bits (53), Expect = 0.002
 Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 11/144 (7%)

Query: 6   LAAVGAATCWAMTGLISAR--PAGHLGALAFNRTR----QLFVASVLGLYVLASGTWRDL 59
           L  VGAA C A+  ++S     AG + A +    R     +FV  ++ L         + 
Sbjct: 151 LYGVGAALCQAVGAVVSRDILSAGEIDAASAAFLRLVGGMVFVVPLIALTKTRYMPVINY 210

Query: 60  QPDA---LW-ALLLSGFIGIFVGDTLLFTCLNRLGPRRSGILFALNAPIAAVLGWAILGE 115
           + D+   +W A +L+  +G      L               L A +A ++  + W +LGE
Sbjct: 211 ESDSGKRVWPAFVLATLLGTTAAIYLQMFAFAYAKAAVVQTLIATSALMSLGVAW-VLGE 269

Query: 116 QLSATAVAGIGLTLAGVLLAILFG 139
           + +   +    + L GV + + FG
Sbjct: 270 RATKATIVWSAVALVGVAILVSFG 293