Pairwise Alignments

Query, 532 a.a., MFS permease from Agrobacterium fabrum C58

Subject, 406 a.a., putative Membrane protein from Pseudomonas putida KT2440

 Score =  108 bits (269), Expect = 5e-28
 Identities = 98/379 (25%), Positives = 156/379 (41%), Gaps = 6/379 (1%)

Query: 19  FAVLWAATVLGNTGSFMRDVASSWLMTDLSASPAAVALVQAAGTLPIFLLAIPAGVLTDI 78
           F   W A V   +G  M  VA  W +  L+ +   + LV      P  L  +  G + D 
Sbjct: 15  FLAFWLARVFTASGFQMLTVAIGWHLYQLTGNVLDLGLVGLVEFAPRVLFMLHTGHVADR 74

Query: 79  LDRRKFLIAVQLLLASVSVTLMVLAHTGMLSVSALIGLTFLGGIGAALMGPTWQAIVPEL 138
            DRRK     Q L   +++ L V + T  ++   +  L FL G   +   P  QA++P +
Sbjct: 75  YDRRKVAALCQSLQGLIALALAVGSATDNVTRELIFALAFLLGASRSFEMPATQALLPNV 134

Query: 139 VKREDIKSAVALNSLGINIARSIGPAVGGILLAAFGAAFTYGADVASYFFV-IAALLWWP 197
           V       AVA ++     A  + PAVGG L  AFG+ + YG  VA Y    +  L    
Sbjct: 135 VPAGLFPRAVAASASATQSATIVAPAVGGFLY-AFGSMWVYGPTVALYAIACVLTLSLQA 193

Query: 198 RAKNANNALQENFFGAFRAGLRYTRASRPLHVVLLRAAIFFAFASAVWALLPLVARQLLG 257
           R + A          +  AG+R+ R SRP  +  +   +F        ALLP+ A+ +L 
Sbjct: 194 RGQVAQRGRAS--IESLLAGIRFIR-SRPDILGAISLDLFAVLLGGATALLPVFAKDILL 250

Query: 258 GDASFYGILLGAVGAGAIAGALVMPKLRARFDADGLLLGAAIVTALVMAGLSFAPPKWLA 317
                 G+L  A   GA+  +L + +   + +    +  A  V  +       +   W +
Sbjct: 251 TGPMGLGLLRSAPAVGALLMSLWLARFPFQRNVGRTMFTAVGVFGVATIAFGLSTSFWFS 310

Query: 318 IIILLFLGGAWITALTTLNGAAQAILPNWVRGRGLAVYLTVFNGAMTAGSIGWGAVGEAA 377
           + +L+ LG A + ++   +   Q   P+ +RGR  AV       +   G    G      
Sbjct: 311 LAVLVVLGAADMISMVIRSSFVQLETPDEMRGRVSAVNGLFIGASNQLGEFESGVTAHWF 370

Query: 378 G-VPGTLLIGAAGLFIAGL 395
           G VP  +L G   L + G+
Sbjct: 371 GTVPAVVLGGVGTLVVTGV 389



 Score = 24.6 bits (52), Expect = 0.007
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 119 LGGIGAALMGPTWQAIVPELVKRE 142
           LGG+G  ++   W  + P L KR+
Sbjct: 378 LGGVGTLVVTGVWIKLFPTLAKRD 401