Pairwise Alignments

Query, 363 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 329 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  183 bits (464), Expect = 6e-51
 Identities = 99/248 (39%), Positives = 149/248 (60%), Gaps = 7/248 (2%)

Query: 55  DASLQVHRGEIFCIMGLSGSGKSTLIRLLNRLIEPSLGKITVKGKDIARLNAAELRELRA 114
           D + +V +GE   ++G SG GKSTL+R +  L     GKI +  +DI  L+  +      
Sbjct: 21  DINCEVAKGEFVTLLGPSGCGKSTLLRCIAGLTSVDSGKILLDDQDIVPLSPQK------ 74

Query: 115 RNIAMVFQSVALLPYRTVLENAGFSLEVRGVAKDERNRIARAALEKVGLADWTSRYPHEL 174
           R+I MVFQS AL P  TV +N  F L ++ V  D+ ++  +  L+ V L D   RYPH++
Sbjct: 75  RHIGMVFQSYALFPNMTVEQNVAFGLRMQKVNADDSHKRVQEVLQLVELKDLAGRYPHQM 134

Query: 175 SGGMQQRVGLARALAADPEIILMDEPFSALDPLIRRQLQDEFRQLTKSLGKSAVFITHDL 234
           SGG  QRV LAR+L   P ++L+DEP SALD  IR+ L+++ RQ+ + LG + +F+THD 
Sbjct: 135 SGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRQIQRELGLTTIFVTHDQ 194

Query: 235 EEAIRIGDRIAIMKDGVIVQVGTAEEIVTKPADDYVSDFVAGISRIHLVKAHTVMQ-PVA 293
           EEA+ + DRI +M  G IVQ G AE + T P D + + F+   + +   KA  ++Q P++
Sbjct: 195 EEALTMSDRIFLMNQGKIVQSGDAETLYTAPVDVFAAGFIGNYNLLDADKATQLLQRPIS 254

Query: 294 EFAASQPQ 301
              A +P+
Sbjct: 255 SRIAIRPE 262