Pairwise Alignments

Query, 363 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 343 a.a., predicted polyamine ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  177 bits (448), Expect = 5e-49
 Identities = 102/249 (40%), Positives = 147/249 (59%), Gaps = 9/249 (3%)

Query: 42  QVLEDFDCVVGVCDASLQVHRGEIFCIMGLSGSGKSTLIRLLNRLIEPSLGKITVKGKDI 101
           QV   F  V  V   S+ +  GE F ++G SGSGK+T +RL+    +PS G I ++G + 
Sbjct: 9   QVSRTFGEVKAVDQVSIDIIDGEFFSMLGPSGSGKTTCLRLIAGFEQPSSGSIRIQGVEA 68

Query: 102 ARLNAAELRELRARNIAMVFQSVALLPYRTVLENAGFSLEVRGVAKDERNRIARAALEKV 161
           A L   +      R++  VFQ  AL P+  VLEN  + L+V+GV K ER+  A  AL  V
Sbjct: 69  AGLPPYQ------RDVNTVFQDYALFPHMNVLENIAYGLKVKGVGKAERHSRAEEALAMV 122

Query: 162 GLADWTSRYPHELSGGMQQRVGLARALAADPEIILMDEPFSALDPLIRRQLQDEFRQLTK 221
            LA + +R P +LSGG +QRV LARAL   P ++L+DEP  ALD  +R Q+Q E ++L +
Sbjct: 123 ALAGYGARKPAQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQGELKKLQR 182

Query: 222 SLGKSAVFITHDLEEAIRIGDRIAIMKDGVIVQVGTAEEIVTKPADDYVSDFVAGISRIH 281
            LG + +F+THD  EA+ + DR+A+   G I QV T   +  KP+  +V++FV G S + 
Sbjct: 183 QLGITFIFVTHDQTEALSMSDRVAVFNRGRIEQVDTPRNLYMKPSTTFVAEFV-GTSNV- 240

Query: 282 LVKAHTVMQ 290
            V+    MQ
Sbjct: 241 -VRGELAMQ 248