Pairwise Alignments

Query, 363 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 385 a.a., ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

 Score =  189 bits (480), Expect = 1e-52
 Identities = 112/307 (36%), Positives = 178/307 (57%), Gaps = 25/307 (8%)

Query: 50  VVGVCDASLQVHRGEIFCIMGLSGSGKSTLIRLLNRLIEPSLGKITVKGKDIARLNAAEL 109
           V  V   SL V+ GEI   +G SG GKST ++++NRLI P+ G++ + G+D   L+   L
Sbjct: 18  VKAVDSVSLTVNEGEICVFLGPSGCGKSTTLKMINRLITPTSGQVFINGEDTTGLDEVTL 77

Query: 110 RELRARNIAMVFQSVALLPYRTVLENAGFSLEVRGVAKDERNRIARAALEKVGLA--DWT 167
           R    R+I  V Q + L P  T+ EN      + G  K + +  AR  +  + L    + 
Sbjct: 78  R----RHIGYVIQQIGLFPNMTIEENITVVPRLLGWDKQKCHERARELMHMIKLEPKQYL 133

Query: 168 SRYPHELSGGMQQRVGLARALAADPEIILMDEPFSALDPLIRRQLQDEFRQLTKSLGKSA 227
            RYP ELSGG QQR+G+ RALAAD  ++LMDEPF A+DP+ R  +Q+EF ++ ++L K+ 
Sbjct: 134 QRYPRELSGGQQQRIGVIRALAADAPVLLMDEPFGAVDPINREMIQNEFFEMQRALNKTV 193

Query: 228 VFITHDLEEAIRIGDRIAIMKDGVIVQVGTAEEIVTKPADDYVSDFV---AGISRIHLVK 284
           + ++HD++EAI++GD+IAI + G ++Q+   + ++  PADD+VS+FV   + + R+ LV+
Sbjct: 194 IMVSHDIDEAIKLGDKIAIFRAGKLLQLDHPDTLLAHPADDFVSNFVGQDSTLKRLLLVR 253

Query: 285 AHTVMQPVAEFAASQPQCDIGTLLRASPRDDIGALIDLTMQSDHDAVAVVE-KDLVIGIV 343
           A    +  A+ A S            SP   +G  ++L  + D   V V + ++  +G V
Sbjct: 254 A----EDAADNAPS-----------VSPETPVGDALELLDEHDRRYVVVTDAQNKALGYV 298

Query: 344 TTRDLLR 350
             RD+ R
Sbjct: 299 RRRDMHR 305