Pairwise Alignments

Query, 282 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

 Score =  188 bits (478), Expect = 1e-52
 Identities = 99/251 (39%), Positives = 150/251 (59%), Gaps = 1/251 (0%)

Query: 20  WIGDNGEGLFDFVSRLLEGSYDGILWLLQLAPP-VVIALIAALLGWRLINLAAGILAGVA 78
           W+  NG   FD +++ LE    G+   L    P V+IAL AAL  +     A      ++
Sbjct: 19  WLTQNGANYFDAIAQGLEFMIHGVTSALTFFNPFVLIALFAALAHFIQRKWALTAFVALS 78

Query: 79  LLFCATMGLWAETMSTLALVTTATILALLVGIPLGIIAGFTKSLDRVLEPILDLIQTMPP 138
            L    +G W ETM TLA VT AT++ +++G+PLGI+A         + P+LDL+QT+P 
Sbjct: 79  FLLILNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRPVLDLMQTVPT 138

Query: 139 YIYLLPAIALLGYGPATALIATFIVAMPPAIRLTSLGIRMTPREFIELGHASGLTPWQMF 198
           ++YL+P + L G G    LI+T + A+   IRLT LGI   P+E ++ G A G +  Q+ 
Sbjct: 139 FVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDVPQELMDAGKAFGCSRRQLL 198

Query: 199 MKIRLPFAIPSVMAGINQSLMMAFGMVVIAGIVGSGGLGETIYGAVRTLDIATSINAAIA 258
            +I LP A+PS+ AG+ Q +M++  MVVIA +VG+ GLG+ +  A+ T DI+    A +A
Sbjct: 199 TRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNALNTADISLGFEAGLA 258

Query: 259 IVILTMVLDRL 269
           IV+L ++LDR+
Sbjct: 259 IVLLAIMLDRI 269