Pairwise Alignments

Query, 282 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 307 a.a., ABC transporter membrane spanning protein (glycine betaine/L-proline) from Agrobacterium fabrum C58

 Score =  190 bits (483), Expect = 3e-53
 Identities = 97/276 (35%), Positives = 161/276 (58%), Gaps = 4/276 (1%)

Query: 11  DIWTEDALGWIGDNGEGLFDFVSRLLEGSYDGILWLLQLAPPVVIALIAALLGWRLINLA 70
           D W  D + WI  N   LF  +   +E        +L   P  +  +++ L+ +RL +L 
Sbjct: 13  DAWIADGVQWIALNLRPLFVAIKWPIENLLAFNDHILHAIPFPIFLVLSFLIAYRLASLG 72

Query: 71  AGILAGVALLFCATMGLWAETMSTLALVTTATILALLVGIPLGIIAGFTKSLDRVLEPIL 130
             I   ++ +  A++G+W E+M+TL+L++TA +++ ++GIP+GI      S+ +V+ P+L
Sbjct: 73  IAIFTAISFVVIASLGVWDESMTTLSLISTAIVISTVIGIPVGIWCAINNSVWQVVRPVL 132

Query: 131 DLIQTMPPYIYLLPAIALLGYGPATALIATFIVAMPPAIRLTSLGIRMTPREFIELGHAS 190
           D++QT P ++YL+P + L G G     +A  I A PP IR T+LGIRM   E +E G A 
Sbjct: 133 DIMQTTPTFVYLVPVVMLFGVGTVPGEVAVVIAAAPPLIRFTNLGIRMVETEMVEAGLAF 192

Query: 191 GLTPWQMFMKIRLPFAIPSVMAGINQSLMMAFGMVVIAGIVGSGGLGETIYGAVRTLDIA 250
           G    Q+  +I+ P AIP+++ G+NQ+++ A  M V+  ++G+ GLG  +   +  LD+ 
Sbjct: 193 GADRRQLLWEIQFPLAIPTILGGLNQTVLTAMVMSVVVAMIGAEGLGLVVLQGLGRLDVG 252

Query: 251 TSINAAIAIVILTMVLDRLTQS----ATSRAKAGAR 282
            +    IAI++L M+LDR+TQ     ATS+AK   R
Sbjct: 253 RAAVGGIAIILLAMILDRITQKLAMPATSKAKRSFR 288