Pairwise Alignments

Query, 283 a.a., ABC transporter permease from Agrobacterium fabrum C58

Subject, 343 a.a., ABC transporter, membrane spanning protein (proline/glycine betaine) from Agrobacterium fabrum C58

 Score =  208 bits (530), Expect = 1e-58
 Identities = 115/266 (43%), Positives = 159/266 (59%), Gaps = 1/266 (0%)

Query: 7   RFSPGIYLAPAVDWLNTNFHPFFAAVTNLIESVLGAIEAVLLYPPAFALIAIATLL-AFF 65
           R   G Y   A+DWL  N   FF  ++ + +SV+ A+  VL  P    ++AI T L A+ 
Sbjct: 70  RLPIGRYAKEAIDWLTGNLAFFFDWLSFIFQSVINALLYVLQAPHPLIIVAIVTALSAWT 129

Query: 66  AINLKAAIVTMLALAFCFFAGLWTQSMQTLALVTVAVIISVSIAFPLGILASRNKRFETA 125
             +    I T L L      G W  + +TLALV  A  + + I  PLGILA+R K     
Sbjct: 130 RRSAGMPIFTALGLLLIINLGYWKATTETLALVIAASAVCMIIGIPLGILAARRKWIYAG 189

Query: 126 LRPLLDIMQTVPPWVYLIPAVMIFSLGRVPAIIATIVYGVPPMLRLTTLAFNQVPKDLLE 185
           +RP LD+MQT+P +VYLIPA+++F LG VP +IAT+++ +P  +RLT L     P  L+E
Sbjct: 190 MRPALDLMQTIPTFVYLIPALVLFGLGMVPGLIATVIFAIPAPVRLTRLGIVSTPPALVE 249

Query: 186 LGQASGASPRAILLKIEIPSATPTLLVGLNQCILLSLAMVVLAGLVGAGGLGAEVTRGLT 245
              A GA+P  +L K+E+P A P ++ GL Q I+LSL+MVV++ LVGA GLG  V R L 
Sbjct: 250 AAVAFGATPSQVLRKVELPFAAPQIMAGLTQTIMLSLSMVVISALVGANGLGVPVVRALN 309

Query: 246 RMEMGPGLRAGLAIVAIAILLDRLSR 271
            + +  G  AGL IV +AI+LDRL R
Sbjct: 310 TVNIAMGFEAGLCIVILAIVLDRLFR 335