Pairwise Alignments

Query, 430 a.a., nitrate ABC transporter substrate-binding protein from Agrobacterium fabrum C58

Subject, 454 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  199 bits (505), Expect = 2e-55
 Identities = 127/431 (29%), Positives = 207/431 (48%), Gaps = 34/431 (7%)

Query: 1   MKKIFSGTVSRRTILKTTATAALVTAVRTAFP----SGAFAATAEPEVKGAKLGFIALTD 56
           M+ +F   + RR  LK   T+    A+ T FP    + AFA T +PE    K+GFI +T 
Sbjct: 52  MRALFPNDLKRRAFLKAVGTSTAAAALATFFPLDAATEAFAQTGKPEKTDLKVGFIPITC 111

Query: 57  AAPLIIAAEKGLFAKHGMPEVEVLKQASWGATRDNLVLGGASNGIDGAHILTPMPYLMHT 116
           A P+I+A   G + KHG+  VEV+K A W   RD  +    +   D AH+L PMP  +  
Sbjct: 112 ATPIIMAHPMGFYTKHGL-NVEVVKTAGWAVVRDKTI----NKEYDAAHMLAPMPLAISQ 166

Query: 117 GKVTQNNVPVPMTILARLNLDSQGISVAKEYAETGVQLDASKLKAAFEKKKADGKEIKAA 176
           G  +    P+P    A  N++ Q  ++  ++ +   ++D    K            +K A
Sbjct: 167 GLGSN---PIPFVAAAIENINGQSFTLGIKHKD---KMDVKSWKG-----------LKFA 209

Query: 177 MTFPGGTHDLWIRYWLAAGGIDPDKDVSTIVVPPPQMVANMKVGNMDVFCVGEPWNEQLV 236
           + +    H+  +RY LA  G+DPD DV   VVPPP+MVAN++  N+D F   +   ++ V
Sbjct: 210 IPYDFSMHNYLLRYLLAENGLDPDTDVQLRVVPPPEMVANLRAENIDGFLAPDNVAQRAV 269

Query: 237 NQGIGFTACTTGELWKGHPEKALGMRADWVEKNPNATKALLMAVMEAQQWCDEMANKEEM 296
             G+GF    +  +W GHP  +     +++   PN   ALL A+++A  +  +  N++ +
Sbjct: 270 FDGVGFIHSLSKTMWDGHPCCSFAASREFISTMPNTYAALLRAIVDATGYASKAENRKAI 329

Query: 297 STILGKRQWFNVPPKDVLGRLKGNINYGNGRVLENTGLQMKFWQDHASYPFHSHDSWFIT 356
           +  +    + N PP  +   L G    G G + ++         D   +P+ S   W +T
Sbjct: 330 AEAIAPAAYLNAPPIVLEQVLVGKYADGLGNIKDDPKR-----VDFDPFPWDSFAVWMLT 384

Query: 357 ENIRWGKFAPDTDVKALVAKVNREDIWRAAAKDLGVADLPASTSRGKETFFDGKVFDPEN 416
           +  RWG+   + D   +  +V          K++G+   PA+T +       GKVFDP  
Sbjct: 385 QMKRWGQIKGEVDYTKVANEVFLATDAAKVMKEMGLTP-PATTMKSFSVM--GKVFDPAK 441

Query: 417 PSAYLESLSIK 427
           P+ Y+ S +IK
Sbjct: 442 PAEYVSSFAIK 452