Pairwise Alignments

Query, 297 a.a., nitrate ABC transporter permease from Agrobacterium fabrum C58

Subject, 293 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  102 bits (255), Expect = 8e-27
 Identities = 80/261 (30%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 40  AAAARNTIPPLVVLAVLLGVWQLLCSAPGSS---LPPPSQVFEESYDLIVSPFFHNGSQD 96
           AA  R  +P  + L VL  +WQ   S    S   LP PS V         +  F     D
Sbjct: 35  AAVGRALLPWALPLGVL-ALWQAAASLGFLSSRVLPAPSDV---------AVAFWRTLGD 84

Query: 97  IGLGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSVWAMRGLDPIFQVLRTVPPLAWLPL 156
             L   V VS  R   G  +    G  LG + G    A    D   Q+LR VP LA +PL
Sbjct: 85  GSLLANVAVSTRRALIGLAIGGSIGFALGVLNGIVRPAETAFDSTMQMLRNVPHLAIIPL 144

Query: 157 SLAAFQDSNPSAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQLEFFFKIMLP 216
            +  F     + IF++ I   +P+ +NT  G+R + +    +A+V  L+    F++I+LP
Sbjct: 145 VILWFGIGEEAKIFLVAIGVAFPIYLNTFHGIRTVDRGLVEMARVYGLSSTALFWRIVLP 204

Query: 217 SAAPYIFTGLRIGIGLSWLAIVAAEMLTGGVGIGFFIWDAWNSSRLPDIIVALAYIGVVG 276
            A P +  GLR  +G+ WL ++ AE ++   GIG+   +A       D++V    +GV+ 
Sbjct: 205 GALPSVLVGLRYALGIMWLTLIVAETISSTEGIGYMTMNA-REFLQTDVVV----LGVLA 259

Query: 277 F-MLDKLVAALGKVITRGAAA 296
           + +L KL  +  + I R A A
Sbjct: 260 YALLGKLADSFTRAIERRALA 280