Pairwise Alignments

Query, 297 a.a., nitrate ABC transporter permease from Agrobacterium fabrum C58

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  148 bits (374), Expect = 1e-40
 Identities = 80/223 (35%), Positives = 123/223 (55%), Gaps = 13/223 (5%)

Query: 71  LPPPSQVFEESYDLIVSPFF--HNGSQDIGLGLRVLVSLERVAYGFGLAAIAGIILGAVI 128
           +P P  V + ++ L+ S     H GS           SL RV  G+  AA+ G+ LG +I
Sbjct: 40  VPTPKAVLDAAWQLLTSSTLLAHLGS-----------SLARVFAGYATAALVGVALGLLI 88

Query: 129 GQSVWAMRGLDPIFQVLRTVPPLAWLPLSLAAFQDSNPSAIFVIFITSIWPVIINTAVGV 188
           G+S WA   L P  +VLR +P +AW+PL++  F  S  S +F+ F  +++P+++NT  GV
Sbjct: 89  GRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMFPSSELSMVFITFTGALFPILLNTVHGV 148

Query: 189 RNIPQDYRNVAKVLRLNQLEFFFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGVG 248
             +       A+ L   +     +++LP A P I TGL IG+G SW  +V AEM++G  G
Sbjct: 149 EAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVTAEMISGQFG 208

Query: 249 IGFFIWDAWNSSRLPDIIVALAYIGVVGFMLDKLVAALGKVIT 291
           IG++ W+++     PDI+V +  IGV+G     LV  LG + T
Sbjct: 209 IGYYTWESYTLQNYPDIVVGMLLIGVLGMGSSALVKRLGALAT 251