Pairwise Alignments

Query, 297 a.a., nitrate ABC transporter permease from Agrobacterium fabrum C58

Subject, 534 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  123 bits (308), Expect = 1e-32
 Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 14/253 (5%)

Query: 31  PRIDLRKWGAAAARNTIPPLVVLAVLLGVWQL---LCSAPGSSLPPPSQVFEESYDLIVS 87
           PR+  R       R+   P+++  V+L +W L   L   P   LP PSQV   +  L+ S
Sbjct: 16  PRVK-RPLAPRQTRHIAAPVLLPLVVLLLWTLSSQLGWMPPQILPAPSQVMITALTLLQS 74

Query: 88  PFFHNGSQDIGLGLRVLVSLERVAYGFGLAAIAGIILGAVIGQSVWAMRGLDPIFQVLRT 147
                      LG ++L+SL R+  G     +AG +LGA++G SV A R L P    L  
Sbjct: 75  DL---------LG-QLLISLHRLVNGLAAGVLAGTLLGALMGASVRAERLLYPTVYALAQ 124

Query: 148 VPPLAWLPLSLAAFQDSNPSAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQL 207
           +P L W+PL +  F   +   + V+    I PV +++  GVR++P    +VA+ LRL  L
Sbjct: 125 IPTLGWIPLFMVLFGIDDGLKLAVLIKAVIVPVTLHSQRGVRDVPPALLDVARTLRLPPL 184

Query: 208 EFFFKIMLPSAAPYIFTGLRIGIGLSWLAIVAAEMLTGGVGIGFFIWDAWNSSRLPDIIV 267
               +++LP+A P  FTGLR+ +  +W++++  E+L    GIG+ +       +L  ++V
Sbjct: 185 TRLTRLILPAALPVWFTGLRLALSQAWVSLIVVELLASSQGIGYLMVWGRQLFQLDIVLV 244

Query: 268 ALAYIGVVGFMLD 280
            +A IG+ G +++
Sbjct: 245 CIAVIGLTGLLME 257



 Score =  102 bits (253), Expect = 3e-26
 Identities = 77/247 (31%), Positives = 115/247 (46%), Gaps = 13/247 (5%)

Query: 50  LVVLAVLLGVWQLLCS---APGSSLPPPSQVFEESYDLIVSPFFHNGSQDIGLGLRVLVS 106
           L V  +LL +WQL           LPPP +V    +          G  D  L   +  S
Sbjct: 289 LAVPLLLLALWQLASHRGWVDALLLPPPGEVLRAIWQ---------GVSDGSLPDAMRHS 339

Query: 107 LERVAYGFGLAAIAGIILGAVIGQSVWAMRGLDPIFQVLRTVPPLAWLPLSLAAFQDSNP 166
           L R   G  L   AG++ G  +G S  A         +LR V   AWLPL  A   + + 
Sbjct: 340 LWRALAGGALGISAGLLAGLALGLSARAEAVCTSTLTLLRQVALFAWLPLITAWVGNDDG 399

Query: 167 SAIFVIFITSIWPVIINTAVGVRNIPQDYRNVAKVLRLNQLEFFFKIMLPSAAPYIFTGL 226
             +  I + + +P+++ T  GV       + VA+VLRL  L     ++LP AAP +FTGL
Sbjct: 400 GKVTFIALVAFFPMLVATHRGVHRRSLALQEVAQVLRLPWLRRLRVLILPGAAPALFTGL 459

Query: 227 RIGIGLSWLAIVAAE-MLTGGVGIGFFIWDAWNSSRLPDIIVALAYIGVVGFMLDKLVAA 285
           R+ +  +WL  + AE  ++ G GIG  + +A     +P I+  +  IGV G ++D L   
Sbjct: 460 RLAMIYAWLGAIGAEYFMSSGAGIGSLMINAQQLLDMPLILSGMLLIGVTGALIDSLGQR 519

Query: 286 LGKVITR 292
           L + +TR
Sbjct: 520 LEQRMTR 526